Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1657
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Entry
BBDE_1657 CDS
T04222
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00250
Alanine, aspartate and glutamate metabolism
bdn00410
beta-Alanine metabolism
bdn00430
Taurine and hypotaurine metabolism
bdn00650
Butanoate metabolism
bdn01100
Metabolic pathways
bdn01110
Biosynthesis of secondary metabolites
bdn01120
Microbial metabolism in diverse environments
bdn02024
Quorum sensing
Module
bdn_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BBDE_1657
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BBDE_1657
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BBDE_1657
00430 Taurine and hypotaurine metabolism
BBDE_1657
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBDE_1657
Enzymes [BR:
bdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
BBDE_1657
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DotU
Motif
Other DBs
NCBI-ProteinID:
BAQ27651
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All DBs
Position
1980239..1981669
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AA seq
476 aa
AA seq
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MSIMHSNINTIAAGYGYSGGADSDSVEVNPLFARPKEAKAFSKFKIPQEGSLPETAYQVV
HDDAMLDGNARLNLATFVSTWMDDYANRLYMEAADKNMIDKDEYPKTAEVESRCWHMLAD
LWHAPDPMNTIGTSTIGSSEACMLGGLALKRRWKEAREKAGLPADRPNLVMSSAVQVCWE
KFCNYFDVEPRYVPISEEHKVLDGYDLDKYVDENTIGVVAIMGVTYTGMYEPVKKISDAL
DRIEERTGLDVRIHVDAASGGMIAPFIQPDLQWDFRVKRVYSISTSGHKYGLVYPGLGWV
VWRETADLPESLIFKVSYLGGEMPTFALNFSRPGAQVLLQYYMFLRLGFEGYRRVQQAAH
DVAKYLSGEIAKMDDFTLWNDGSDIPVFAWMLKDKPDRKWNLYDLQDRLRMKGWLVPAYP
MPVDLTQVTVQRIVVRNGFSHDMAESFLKDLKACVKYLDGLKAPMPSEARVSGFHH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataatgcattccaacatcaataccatcgcggcaggttatggttattctggtggt
gccgattccgacagcgtggaagtcaacccactgttcgcccgtccgaaggaagccaaggcc
ttctctaagttcaagattccgcaggaaggaagcctaccggagaccgcctatcaggtggtg
cacgacgacgccatgcttgacggcaacgcacgcctgaacctcgcgaccttcgtaagcacc
tggatggacgattatgcgaaccgcctgtacatggaggcggccgacaagaacatgatcgac
aaggacgagtacccgaagaccgccgaagtcgaatcccgctgctggcatatgctcgccgac
ctctggcatgcgccggacccgatgaataccatcggaacctccaccatcggctcctccgag
gcatgcatgctgggcggcctggccttgaagcgccgctggaaggaagcgcgagaaaaggcc
ggcctgccggccgatcgaccgaatctggtgatgagcagcgccgtgcaggtgtgctgggag
aagttctgcaactacttcgacgtggaaccgcgttacgtgccgatctccgaagagcacaaa
gtgcttgacggctacgacctcgacaagtacgtcgacgagaacaccatcggcgtggtggcc
atcatgggcgtgacctacacgggcatgtacgagccggtcaagaagatctccgacgcgttg
gaccgcatcgaggaacgcaccggactcgatgtgcgcatccacgtggatgccgcttcgggc
ggtatgatcgcaccgttcatccagcccgaccttcagtgggacttccgcgtcaagcgcgtg
tactccatcagtacctccggacacaagtacggtctggtctacccgggcctgggctgggtg
gtatggcgtgagaccgccgacctgccggaaagcctgatcttcaaggtgagctatctgggc
ggcgaaatgccgacctttgcgctgaacttctcccgccccggcgctcaggtgctgttgcag
tactacatgttcctgcgtttgggattcgaaggctaccgccgcgtgcagcaggccgcgcac
gatgtggcgaagtacctgtcgggcgaaatcgccaagatggacgacttcactctatggaac
gacggttccgatattccggtgttcgcttggatgctcaaggacaagccggatcgcaagtgg
aacctgtacgatctgcaggatcgtctgcgcatgaagggctggctagtgccggcctatccg
atgccggtggatctaacgcaggtgaccgtgcagcgcatcgtggtgcgcaacggattcagc
catgatatggccgaatcgttcctgaaggatctgaaggcctgtgtgaagtatctggatgga
ttgaaggcgccgatgccgagcgaggcacgggtctccggcttccatcactga
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