Phocaeicola dorei HS1_L_1_B_010: EL88_24475
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Entry
EL88_24475 CDS
T03262
Name
(GenBank) RNA polymerase sigma 70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdo
Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EL88_24475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdo03021
]
EL88_24475
Transcription machinery [BR:
bdo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EL88_24475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_24
GerE
HTH_11
Sigma70_ECF
HTH_28
TnsD
HTH_40
HTH_10
HTH_38
HTH_20
HTH_Tnp_ISL3
HTH_5
HTH_Mga
PCI
PurL_C
Motif
Other DBs
NCBI-ProteinID:
AII66115
LinkDB
All DBs
Position
5616292..5616801
Genome browser
AA seq
169 aa
AA seq
DB search
MKLSAKEFEYQFRCLYRPLNMYALRYTENLDDAEDIVQQAFSDVWEKLVGGTSIQNLKAY
MYQTVRNRSLTLVTNRQTHCETTELTDLEDLTEEERIIRSERDARLWTAIDHLPTERKKI
FLLSKRDGLTYQEIATELGISIKTVEHQISKALKTLRETAIKIYTFFFG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatcggcaaaggaatttgaataccaatttcgctgtctttaccgtccgctgaat
atgtatgccctgcgctatactgaaaatctggatgacgcagaagacatcgtccaacaagcc
ttctctgatgtatgggaaaagcttgtcggaggcacatctattcaaaatctgaaagcttat
atgtaccaaactgtacgtaaccgctcactcacactggtaaccaaccggcaaacacactgt
gaaacaaccgaactgacagacttggaagatttaacagaagaagaacgcatcatccggtca
gaacgtgatgctcgtttatggacagctatcgaccaccttcctaccgaacggaaaaagatc
tttctgctttccaaacgtgacggccttacttatcaggaaattgccaccgagctgggtatt
tctataaagacagtcgaacatcaaatcagtaaggcactgaaaacattacgagaaacagcc
attaaaatatatacttttttcttcggataa
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