Bdellovibrio sp. qaytius: CIK05_03905
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Entry
CIK05_03905 CDS
T05880
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03030
DNA replication
bdq03430
Mismatch repair
bdq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIK05_03905
03430 Mismatch repair
CIK05_03905
03440 Homologous recombination
CIK05_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdq03032
]
CIK05_03905
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_03905
Enzymes [BR:
bdq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIK05_03905
DNA replication proteins [BR:
bdq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIK05_03905
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIK05_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_19
NACHT
AAA_16
TIP49
DNApol3-delta_C
RuvB_N
Mg_chelatase
AAA_22
DNA_pol3_delta
AAA_30
IstB_IS21
Parvo_NS1
nSTAND3
ResIII
PhoH
Fer4_6
RNA_helicase
TsaE
ATPase_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AZZ35972
UniProt:
A0A3T0RP83
LinkDB
All DBs
Position
790563..791516
Genome browser
AA seq
317 aa
AA seq
DB search
MASLMSQVVGHEAQKFMLQSAIENQSLPHAMVFSGPAGIGKTKLAMAITQNLVCESPVNK
QACGHCGACVRVEKNQSESLRLVAAQGAQIKIDQIRDILSYLSLASDGQKRVVIIDQANM
MNAQASNSLLKTLEEPPPDVYFILTTTDVRLLMPTIRSRSQIISFKALSQDNLQQINPGL
SSWMYKSARGQAGKLLDFSGGESLERRNSDLSFYEHFWTNKSFVLETEIKEFAKDRATAA
GILKNWFTFTRDMIVLSQGARDQVLNSDQITTLIKLDFIPVEKLYDFSSALLQAIQDIDK
VDMTLLFESLWVKHARI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttaatgtctcaggtcgtaggccatgaagcacaaaagtttatgcttcagtct
gccattgaaaatcaatccttaccgcatgcgatggttttctcgggccctgcaggaatcggt
aaaacaaaactagcgatggcgatcacacagaatttagtgtgtgaatctcctgttaataaa
caagcctgcggtcattgcggcgcttgtgtgcgtgttgaaaaaaatcagtctgaaagttta
cgtttagttgcggcacaaggtgcgcaaattaagattgatcagattcgtgatattttatct
tacttaagtttagccagtgatggacaaaaacgtgtggtgatcattgatcaagccaacatg
atgaatgcccaggcttcaaattctttacttaaaactttagaagaaccgccacctgatgtt
tattttattctgacaacgacagatgtgcgtttgttaatgccaacgatcagatctcgttcg
caaatcatttcattcaaagcgttaagccaagataatttacagcaaattaatccggggtta
tcgagctggatgtataaatcagcgcgcgggcaggccggtaaacttttagatttctctggt
ggagaatctttagagcgtagaaattctgatttaagtttttatgaacacttttggacaaac
aaaagttttgttttagaaactgaaattaaggaattcgccaaagatcgcgccacagccgca
ggtattttaaaaaattggtttacgttcacacgcgatatgatcgtgttatcacaaggggcg
cgtgatcaggttttaaattctgaccagatcacgaccttaattaaattagattttattcca
gtcgaaaaactttacgatttttcttcggcgttattacaagccattcaagatatcgataaa
gtcgacatgacattactttttgaatcactgtgggtgaaacatgcaagaatctaa
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