Betaproteobacteria bacterium UKL13-2: AEM42_01085
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Entry
AEM42_01085 CDS
T04342
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
beb
Betaproteobacteria bacterium UKL13-2
Brite
KEGG Orthology (KO) [BR:
beb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
beb03016
]
AEM42_01085 (rph)
Enzymes [BR:
beb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
AEM42_01085 (rph)
Transfer RNA biogenesis [BR:
beb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AEM42_01085 (rph)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AMS31346
UniProt:
A0A142LGK0
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All DBs
Position
234071..234790
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AA seq
239 aa
AA seq
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MTRSYQRTANDLRPIKLTRRYTKHAEGSVLIEMGDTKVLCTASVEERVPPHKKNSGEGWV
TAEYGMLPRSTNTRSDREAARGKQTGRTQEIQRLIGRSLRAVVDLKKLGERQITLDCDVL
QADGGTRCASITGAFVALHDAISTLMEKGAIKQTPIRDFVAAVSVGIGDAVAILDLDYVE
DSSCETDMNVVMTGSGTFIEIQGTAEGVPFTRTQSDQLLALAESGIAQLIAAQRAALAG
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgacacgttcataccagcgtactgccaacgaccttcgcccgatcaaacttacgcgccgc
tacaccaaacacgcggagggctcggtcctgattgaaatgggagacaccaaggtgctttgt
acggcgagtgtggaggagcgagttccgccacacaaaaagaactcgggtgagggctgggtc
actgccgagtacggcatgctgccacgctctaccaacacacgcagtgatcgagaggccgcg
cgcggaaaacaaaccggccgtacgcaagaaattcaacgcctcatcggtcgcagcctgcgt
gcggttgtggatctgaagaagttgggtgaaagacaaattacgttggactgtgatgtcttg
caggctgacggcggcacacgctgtgcgtccatcaccggggcattcgttgcgttgcacgac
gcaatctcaactttgatggaaaaaggggcaatcaaacaaacgcccatccgcgattttgtt
gcggcagtgtcggtgggtattggtgacgcggtcgctattcttgaccttgactacgttgaa
gattcatcgtgcgaaaccgatatgaatgttgtcatgaccggctctggaacattcattgaa
attcagggaacggcagagggcgtgccctttacccgtacccagtccgatcagttgttagca
cttgccgagagcggtatcgcgcagctcattgcggcacagcgcgccgcgttggctgggtaa
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