Pseudobdellovibrio exovorus: A11Q_1036
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Entry
A11Q_1036 CDS
T02492
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bex
Pseudobdellovibrio exovorus
Pathway
bex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A11Q_1036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bex03400
]
A11Q_1036
DNA repair and recombination proteins [BR:
bex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A11Q_1036
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A11Q_1036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
Motif
Other DBs
NCBI-ProteinID:
AGH95252
UniProt:
M4V779
LinkDB
All DBs
Position
1047822..1049894
Genome browser
AA seq
690 aa
AA seq
DB search
MAKTYKKNFELVSPFKPSGDQPKAIETMVENFQKGLKHQTLLGVTGSGKTFSMAHTIAQM
NMPALVLAPNKTLAAQLYSEFKELFPSNAVEYFVSYYDYYQPEAYIPSSDTYIEKDSAIN
EQIDKMRHSATRSLFDRRDVIIVSSVSCIYGLGSPEAYEGMMIQVANGQKLKRDDFLREL
IRIQYTRNNVDFARGNIRVRGDVVEVFPPYEDSRALRVEFFGDFVERICWIDPLTAQIYE
ELDQVGIYPGSHYTTGDENLKRAIQTIQVELRERIQELNSQIKFLEAQRLEQRTYYDIEM
IEQIGFCSGIENYSRHLTGRGPGEPPPTLLEYFPKDFLTFIDESHVTVPQIGAMYRGDRA
RKSTLVEHGFRLPSALDNRPLSFQEFEKMVDRVVYVSATPAVYELEKSEGLIVEQIIRPT
GLVDPIVEVRPVKNQVDDLLKEIRIRIEKKERVLITTLTKRSSEDLTEYYESIGIKVKYL
HSDIDTLERSEIIRDLRLGVFDVLIGINLLREGLDIPEVSLVGITDADKEGFLRSERSLI
QTIGRAARNAEGRVILYADRITQSMQKAMDETARRRKLQMEYNEVHGITPKTIKKKIREG
IGEMFDGTLSTHQVQGVKDKTAQQLKKFAEKPNKIQDEITKLRDKMKKLSAELEFEEAAS
VRDEIKRLEILELQIREGAEQDRTSTGSET
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgtacaaaaagaattttgaactagtgtcgccatttaagccttctggggat
cagcccaaggcgattgagactatggttgaaaactttcaaaagggactgaagcatcagact
ctattgggtgtgacgggaagtggtaagaccttttccatggctcatacaattgcgcaaatg
aatatgccggcgttggtgctggctccgaataaaacattggccgctcagctttactcggaa
tttaaagagctatttcccagtaatgcggttgagtactttgtatcttactatgattactat
caaccagaggcttatatcccatctagtgacacttacattgaaaaagactctgccattaat
gaacaaatagataaaatgcgtcactcggcgacacgttcgctgtttgatcgtcgggatgtg
attatcgtatcttccgtgtcctgtatttatggtttgggttcaccagaagcctatgaaggc
atgatgattcaagtggcgaatggacaaaagctcaaacgcgatgatttcttaagggaatta
attcgtattcagtacacgcgtaataatgtcgattttgcgcggggaaatatccgcgtgcgg
ggtgatgtggttgaggtctttcccccctacgaagactcgcgggctttgcgggttgagttc
ttcggtgattttgttgaacgtatctgttggatagatccattaacggcacagatttatgaa
gaattagatcaagtggggatatacccagggtcgcattatacgacaggtgatgaaaactta
aaaagagcgattcaaacgattcaggttgaattgcgcgagcgcattcaggaactcaattcg
cagattaagtttttagaagctcagcgattagagcagcgaacgtattacgatattgaaatg
atcgaacagatcggtttctgttctggcattgaaaactattcgcgtcacttaaccggtcgc
ggcccaggtgagccgcctcccacactgttagagtattttccgaaagattttttaacattt
attgatgagtcccatgtgacagttccacagatcggggcgatgtatcgaggggacagagcg
cgtaagtccacgttagtagagcatggttttcgcttgccctcagctttggataatcgtccg
ctgagcttccaagagtttgaaaagatggtggatcgtgtggtctatgtatcagcgacgcca
gcggtgtatgagttagaaaaatcagaagggctgattgttgaacagatcatccgaccaacg
ggcttagtcgaccctatcgtggaagtgcgtccggtaaagaatcaagtggatgatttgtta
aaagagattcgcatccgtatcgagaaaaaagagcgggttttaatcacaacccttacgaaa
agatcttctgaagatttaacagagtactacgaatctattggtattaaagtgaagtatctt
catagcgatatcgacacattagagcgtagcgaaattattcgggatttgcgcttgggtgtt
tttgacgttttgattggtatcaacttgctacgtgaaggtttagatattccagaagtcagt
ttggtagggattacagatgcggacaaagaaggtttcctgcgttcggagcgctcacttatt
cagaccatcgggcgtgcggcaaggaatgcagaaggacgtgtgatcctttacgcggatcgc
atcacgcaatctatgcaaaaggccatggatgaaacggcccgcagaagaaaactacaaatg
gagtataatgaagttcatgggattactccgaaaaccatcaaaaagaaaatccgcgagggt
attggggaaatgtttgatggcacgttaagtacgcatcaggtccaaggcgtaaaagataaa
acagctcagcagttaaaaaagtttgctgaaaagccgaataagattcaggacgaaatcact
aagctgcgcgataaaatgaaaaaattatctgcggagttagagtttgaagaggcggcctct
gtacgtgatgaaattaaacgtcttgagattttagaactgcaaattcgcgagggcgcagag
caagacagaacctcaacggggagtgaaacataa
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