Bacillus freudenreichii: NCTC4823_03418
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Entry
NCTC4823_03418 CDS
T06767
Symbol
zraR_3
Name
(GenBank) Fis family PAS modulated sigma-54 specific transcriptional regulator
Organism
bfd
Bacillus freudenreichii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
HTH_50
AAA_5
PAS_4
PAS_8
Mg_chelatase
HTH_8
AAA
AAA_2
AAA_3
AAA_16
RsgA_GTPase
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
VEF49300
LinkDB
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Position
1:complement(3517428..3519455)
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AA seq
675 aa
AA seq
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MILWKDILKPITVVVGYDDSIKSVIQKITSERTDIAFVEKQDALVGYITNSCLLEQIETG
QSLDEPIKYKNDILKVPDAIPVEFFHNVTTVIGVDSKGDVAGYSTVRNARHQINELQLIH
LNEIIHGAGVGIVRTNSQFEIEFMNETAERFLGLPRSFLLARNYEALLTTEKDLQRVLSG
ETLVSVNSTINFKQMSGNFYPLKIEGEITGLVHMFYLREEFEEAVQELDFVRHLYSDLQA
VYDSSNEQILVIDEKGIILRVAGKFLRSFWKMEEADQIIGKQIRDFARKKIFQPDIFEMC
VGQKKKVTSIQESSSNTRIWSVATPVYHEGKLEKVVILSREITSTAPPHEQKEEDAPSIR
TEEKQLVYRSGKIASLLNNLRRAAKMNSTILLEGESGVGKEIFAHEIHAASPRKDCPLIR
VNCGAIPEQLIESELFGYEKGAFTGADRRGKAGLFELANTGTIFLDEIGDLPLNMQVKLL
RVIQEREVARIGGTDTIPIDVRIIAATNKDLKAMVANGEFREDLFYRLNVIPLRIPPLRE
RKEDIFPLAVYFLEQFKHMYSIEKSYTPDAISVLETYGWPGNIRELENIIERLIVFSEEE
WIDREVVLKVLYGDDESKRTQPLVLEMMPLKEAVAELETQLIELGMKKYGTAAKVSEVLE
VSPATISRRMKKIRG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
ttgattctctggaaagacatcctgaaaccgattacagtagtggtcggatatgatgattcg
attaaatcggttattcaaaagattactagtgagcgaactgatatcgcctttgttgaaaag
caagatgcattggttggctatattacaaacagttgtttactagaacagattgagacggga
cagagcctagatgaaccgattaaatataaaaacgatatattaaaggttcctgatgcgatt
ccggtagagttctttcataatgtaacaaccgtgataggggtagattcaaaaggcgatgtt
gctgggtacagcacggtcaggaatgcccgccatcaaatcaatgaactgcagttgattcat
ttaaatgaaatcatccatggtgcgggagtcggtattgttaggacgaacagccaatttgaa
attgaattcatgaacgaaactgcagaaagatttttgggcctgcccaggtcttttctttta
gcacgaaattatgaagcgcttttgacaactgaaaaggacttacagagggtgctctctgga
gagacgctagtcagtgtaaacagtacaatcaacttcaaacaaatgagcggaaatttttac
ccgctaaaaattgaaggagaaatcacagggctggtccatatgttttacctccgggaagaa
ttcgaggaggctgtccaggaactggactttgtccgacatctatattctgatttgcaggca
gtctatgattcatccaatgagcaaattttggtcattgacgaaaaaggaatcattcttcgc
gtagccggaaagtttttaagaagtttttggaaaatggaagaagcggatcagattattggg
aagcaaataagggattttgcgaggaagaagatttttcagccggatatttttgagatgtgt
gtcggccagaaaaagaaagtgacctccatccaggaatcctctagcaatactcggatctgg
tctgtcgccacgccagtctatcatgagggaaaactggaaaaagtggtcatcctttcgcgc
gagatcacttcgactgcaccaccccatgaacaaaaagaggaggatgctccatctatacgg
acggaagaaaagcagcttgtctaccgttctggaaaaattgcttctctgttaaacaatctt
aggagagcggccaagatgaattccaccattcttctcgaaggggagtccggggtgggaaaa
gaaatttttgcgcatgaaatccatgctgccagccctaggaaagactgtcctcttatccga
gtcaactgcggcgccattcctgagcagctgattgaaagcgagctgtttggttatgaaaaa
ggagcatttacgggagctgaccgaagaggaaaagccggattatttgagctggccaatacg
ggaacaatttttcttgatgaaatcggggatcttccgttgaacatgcaggtgaagctgctc
cgggtgattcaggaacgggaagtcgcacgcatcggagggacggatacgattccgattgat
gtccggataattgctgccacgaacaaagacttgaaagcaatggtggcaaacggggagttc
cgagaagatctcttttaccgcttgaatgtcattccgctccgaattcctccgcttcgggag
agaaaagaagatatttttccattggcagtttattttctagaacagttcaagcatatgtac
agtatagagaagagctatacacctgatgcgatttcagtgcttgaaacgtacggatggccc
ggaaatattagagaattggaaaatataattgagagattgattgtttttagcgaggaagag
tggattgaccgcgaggttgttttgaaggtgctgtacggtgatgatgaatcaaagagaaca
cagccgctcgtattggagatgatgccgttgaaagaagctgtggccgagcttgagacgcag
ttgatagaactcggcatgaagaaatacggtacagcggccaaagtgtcggaagttttggag
gttagccctgctacaatcagcagacggatgaaaaagatcaggggataa
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