Bacteroides fragilis 638R: BF638R_1494
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Entry
BF638R_1494 CDS
T01691
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF638R_1494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfg03021
]
BF638R_1494
Transcription machinery [BR:
bfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF638R_1494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_40
Motif
Other DBs
NCBI-ProteinID:
CBW22031
UniProt:
E1WSU6
LinkDB
All DBs
Position
1753219..1753797
Genome browser
AA seq
192 aa
AA seq
DB search
MHIKTNPKDKISFNQLYNDYQTRFLNFANTYVRDWDVAEDITTEALIYYWENRNTLSEVS
NIPAYILTIIKNKSLNYLRHLQIREEHSENIRKYIEWELNARIVSLDACEPYELLVKEMQ
ELIQQTLDKLPERTRKIFILSRYENKSYKEIAALMNMTTKGVDFHICKALKALQINLKDY
FPLFLYFLMKFH
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcatattaagactaatccgaaagataaaatatcttttaatcagctatataatgattat
cagacacgttttttgaattttgctaatacctatgtcagagattgggatgtagcggaagat
ataacaacagaggcgttaatttattattgggaaaacagaaatactttatctgaagtatcc
aatattcctgcatatatacttaccatcataaaaaacaaaagtcttaattatcttcgtcat
ttgcagatacgggaagaacattctgaaaatattagaaaatatattgagtgggaactcaat
gcacgtatcgtttctttagatgcttgcgaaccttatgaacttttagtcaaagagatgcaa
gagctgattcagcaaactttggataaactgccggaacgtacacgcaaaatatttatttta
agccgttatgaaaacaaatcgtataaggagattgctgctttaatgaatatgacaaccaaa
ggtgtagactttcatatttgtaaagctttaaaggcattacagattaacctaaaagattat
tttccattatttctttattttttgatgaaatttcactag
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