Bacteroides fragilis 638R: BF638R_3473
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Entry
BF638R_3473 CDS
T01691
Name
(GenBank) putative LPS biosynthesis related dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg00521
Streptomycin biosynthesis
bfg00523
Polyketide sugar unit biosynthesis
bfg00541
O-Antigen nucleotide sugar biosynthesis
bfg01100
Metabolic pathways
bfg01110
Biosynthesis of secondary metabolites
bfg01250
Biosynthesis of nucleotide sugars
Module
bfg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BF638R_3473
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BF638R_3473
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BF638R_3473
Enzymes [BR:
bfg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BF638R_3473
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBW23934
UniProt:
E1WVM5
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Position
complement(4110754..4111296)
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AA seq
180 aa
AA seq
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MNVIKTAIDGVVILEPRIFKDDRGYFFESFNQREFEEKVCKTTFVQDNESKSSYGVLRGL
HFQQAPFAQSKLVRVVKGAVLDVAVDIRKGSPTFGQHVAVELTEDNHRQFFIPRGLAHGF
SVLSEEVVFQYKCDNFYAPHSEGAITWDDPDLGIDWRIPADRVILSEKDSRHPRLKDLNL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaataaagactgctatcgatggggttgttatcctcgaaccccgtatttttaaa
gatgaccggggatatttctttgaatcttttaatcagagggagtttgaggaaaaagtatgc
aagactacatttgtccaagacaatgaaagtaaatcaagttatggtgtactccgtggttta
cattttcaacaggccccttttgctcagagtaaattggtgcgtgtagtgaaaggagcggta
ttggatgtagctgttgatatccgtaaaggatctcctacatttggacaacatgtggcagta
gagttgacggaggataatcatcgtcaatttttcattccccgtgggttggcacatggattc
agtgtattgagcgaggaagtcgtttttcagtataagtgtgataatttttatgctccgcat
agtgagggtgccattacctgggatgatccggatttgggtattgactggcgtattccggca
gatcgtgtgattctctcggagaaggacagcaggcatccccggttgaaagatttaaattta
tga
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