Branchiostoma floridae (Florida lancelet): 118406184
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Entry
118406184 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118406184
KO
K11997
tripartite motif-containing protein 2/3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118406184
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118406184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DED
DUF5128
SGL
NCOA6_TRADD-N
TRADD-like_N
Gmad1
Nuf2_DHR10-like
DUF745
Motif
Other DBs
NCBI-GeneID:
118406184
NCBI-ProteinID:
XP_035661960
UniProt:
A0A9J7HLU3
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Position
18:2449747..2457218
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AA seq
728 aa
AA seq
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MAGPEREFTGLNDADRRHFDFMQTLLRISDELSDEETANVKLFCMHLIPKNKSEKLNRAV
DVFVVLIELCKIDQENLDFVEEILERIGRQDLVRDILRPFQPPDREIPENPELRPGTQSA
EDGTADGTTMSNTYLVINGQRHMIQETIDHHRRNIASLCRIKRSQVKFRGYKKGKSILVH
FSIPRENTGVLRLMANHSDPRLVYMGVKSLQIDTEAPIEVTRETMLYDFKRQVPADDIEV
GCSTQIKQQRTPKNWTRLSALNLFSDALPLHLQVAESLEYQGFSYSLVRALAQRDRLREH
QMKQLIQTLKKAEVDSNTFMTMRSELIIRKNELKEARETITVLEKQLQLAREDTEKAKQV
MIRSHVMEYRGEKPPGGWSGQAEKIDVATQTHLMDDKRTKRMPGFFSAMTESDNGRKPEE
VQQISSPSRKEQNQSKPAGAEGTTVHAADDGNLAKSKVTYGGLGLGRTFVNPRGVAVSRS
NEIFVADTGNKQVQVHSIHGNRLQNFPTVVSGQLMEPHDVSVDNNGALWVVGRGKSADYV
VQYNMDGTIVSKFDLPKVGDYRGIAVDGVSRVDFKRILVTEASREMSRWEIQVFTPEGDL
VQAFRHPDSGMKLPEYVAVDEGGNILVTDSTTHSVYIFDEFGKYLFKFGGKGSGKGQMLY
ANGICTDSSGHIIVADCRNSRVQIFNSHGEYIHHIDNGCWTEGVAIGPDGHLVVTNFYDN
TVSVYPSY
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaccggaacgggaatttacaggactaaacgatgctgatagacggcattttgac
ttcatgcagactttactccgtatatctgatgaactctctgatgaggaaacagcgaatgtt
aagttgttctgcatgcacctgattccgaaaaataagtcggaaaaactcaaccgggcagtt
gatgttttcgttgttctgatagaattgtgcaaaatagaccaggagaacctggactttgtt
gaagagatcttggagagaattggacgacaggatcttgtaagggatatcttgcgcccgttc
caaccgcctgaccgagagattcctgagaaccccgaacttcgacctggaacacaaagtgct
gaggatggaactgcagatggaactacaatgtccaacacctacttggttataaatggtcaa
aggcacatgatccaggaaaccatagatcatcatagacgcaacatagcatcgctgtgtcgc
attaaaaggtcacaggtcaagttcagagggtacaagaaaggcaagagcatcctggtgcac
ttctccattccgcgggagaacacaggagtgctaaggctcatggcaaatcactccgacccg
aggcttgtatacatgggcgtcaagtcactgcaaatcgacacggaagcacccatagaggtc
acaagggaaacaatgctgtatgatttcaagagacaggtaccagcagatgacattgaagta
ggatgcagtactcaaatcaaacaacagaggacgccaaagaactggacccgcctgtctgcc
ctgaacctgttctccgacgccctgcccctccacttgcaggtagccgagagtctggagtac
cagggcttttcctacagcctggtccgggctctggcgcagagggatcggctgagagaacac
cagatgaagcagctcatccaaaccctcaagaaggcagaggtggattccaacacgttcatg
accatgcgttctgagctgatcatcagaaaaaatgagttaaaagaagcccgtgagaccatc
acagttctagaaaaacagcttcagctggctcgtgaagacacagagaaagccaagcaagtc
atgatcaggtctcacgtgatggagtacaggggagagaagccacctggaggctggtccgga
caggccgagaagatagatgtagctacacaaacacacctaatggatgacaagcgcactaaa
cgaatgccaggatttttttctgcaatgacagaatctgacaatgggagaaagccagaggaa
gttcaacagatttcgtccccatcgagaaaggagcaaaaccaatccaagccagctggggcg
gagggaacaactgttcacgcagctgatgatgggaatttggcaaaaagtaaagtgacttac
ggtgggctgggtttggggcgtacgtttgtgaacccgcgcggtgttgcagtgtccaggagt
aatgaaatatttgtggctgacacaggcaacaaacaggttcaagtacacagcatacatggt
aatcgcctccaaaactttccaacagttgtttcaggtcagttaatggagccacatgacgtg
tctgttgataataacggcgctctgtgggtagttggacgaggaaaatcagccgactatgtt
gtacaatacaacatggatggcactatcgtgtcaaagtttgacctaccaaaggttggggac
taccgagggattgcagttgacggtgtatcccgcgtagactttaagcgcatcttggtgact
gaggccagtcgagagatgtcgcgatgggaaatacaggtgttcactccagaaggagacctg
gtacaggcgtttcggcatccagattctggaatgaaactccctgagtacgttgctgtggat
gagggtgggaacatccttgtgaccgacagcactactcattcagtctacatatttgatgag
tttgggaagtacctattcaagtttggtggtaagggaagtggcaaaggccagatgctgtat
gcaaacggtatctgtacagacagctcggggcatatcatagtggcggactgtaggaacagt
cgggtacagattttcaatagccacggcgagtacatccatcacattgacaatgggtgctgg
acagaaggtgtggccattggaccagacggtcacctggtagtgaccaatttctatgacaat
acagtgtctgtatatccaagttattaa
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