Branchiostoma floridae (Florida lancelet): 118409015
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Entry
118409015 CDS
T01074
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04137
Mitophagy - animal
bfo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118409015
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118409015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118409015
04121 Ubiquitin system [BR:
bfo04121
]
118409015
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118409015
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118409015
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118409015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF3_RING
zf-TRAF_2
Sina_ZnF
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
ATG16
Crescentin
Wtap
CALCOCO1
DUF4407
Fez1
Motif
Other DBs
NCBI-GeneID:
118409015
NCBI-ProteinID:
XP_035665776
UniProt:
C3ZG39
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MPGFAVKRKGGRIEPKYLCTICALLLCEPKQTPCGHRYCQSCVEDLARSGRRRCRARDCG
EDIRLQDVYPDKAIEREILSIAIFCSNVEDGCKWEGIVRHLMAHLSECDFEKITCINAGQ
GCKVLICRKNLANHLQSDCEYRPVTCQWCQETTPHKEHKDHRQTCPVAPVQCDWCGKKGL
TRAQIQEHQQPETGDCPKMKIACSFEHMGCKEKMEKRQLAEHLKKSVQNHLNMTKTYIVN
FYSNFEHHRQQEVESRENMRILLPRLEKDIKDVDGKIAEIESKLSGEQASGAASSGGNKT
LENRIEQERARVEELRRKIAAWETRVGTFEGIVAVLNREIEKCSSQMEAYERQRRQDREI
IETLERKVRSLERIIALKDVALAEQDLRIQTLEMTSYDGVLTWKIADFTRKRHDAITGKT
ASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKVSFM
LVDQNNRENVTDAFRPDPTSSSFQRPTSDMNIASGCPLFVPLSQLDSSSHGYVRDDTMFL
KIIVDTSDL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtttgctgttaaacgtaagggaggcaggattgaacccaaatacctgtgtacc
atctgtgcgttattgctctgtgaaccaaaacaaacaccatgtggtcatcggtactgtcaa
tcctgtgtggaggatctcgcaaggagtgggagacgacgatgtagagctcgcgactgcggc
gaggacataaggcttcaagacgtgtatcccgacaaagccatagaaagggagatactgagt
atagcaattttctgcagcaatgtcgaagatggctgtaaatgggaaggcattgttcgtcat
cttatggcacatctttcagaatgcgacttcgagaagatcacatgcatcaacgccggccaa
ggctgtaaggtgttaatatgcaggaagaacctggccaaccatctacagtctgactgtgaa
tatagacctgtaacgtgtcagtggtgtcaagaaacaactcctcataaggaacacaaggat
cacagacagacctgcccagttgccccagtacagtgtgactggtgtggtaagaaaggtctg
actcgggctcagatacaagagcatcaacaacccgagacaggagactgtcccaaaatgaag
atagcttgcagctttgaacacatggggtgcaaggaaaaaatggagaagaggcaactggcc
gagcatctaaagaagtcagttcaaaatcatttgaacatgactaagacctacattgtcaac
ttttattccaatttcgaacaccatcgacagcaagaggttgagtcgcgcgaaaatatgaga
atccttcttccacggctagaaaaggacattaaagatgttgatggaaaaattgcagaaata
gaaagtaagctgtcaggcgagcaagcatcgggagctgcttcgtcaggcggcaacaaaact
ctagaaaaccggattgagcaggaacgtgcgagggtggaggaactgaggaggaaaatagct
gcatgggagacaagggtcggcacgtttgaggggattgtagcggttctgaaccgcgagata
gaaaaatgtagttctcaaatggaggcgtacgaacggcaacgtcgtcaggacagggagatc
atcgaaactctggagaggaaggtcaggtctctggaaaggatcatcgctctgaaggacgtt
gccctcgcggaacaagacctccggatccagacgctagagatgacatcttacgacggcgtc
ttgacttggaagatcgcagacttcacacgtaagcgtcacgacgccattacggggaagaca
gcaagtttctactcgccatgtttcttcaccagccgtacagggtacaagatgtgcgcccgg
atctacctgaacggagacgggatggggaagggcactcatgtcagcctgttcttcgtcgtc
atgagggggcactacgatggactactgcgctggccgtttagacaaaaggtatctttcatg
ttggtggaccagaacaaccgagaaaacgtgacggacgcgttccgtcctgacccgaccagc
tcgtccttccagcggcccaccagtgacatgaacatcgccagtggatgtccgctcttcgtg
ccgctcagtcaactggacagcagcagccatggttacgtcagagacgacaccatgtttctg
aagatcattgtggacacttcagacctttaa
DBGET
integrated database retrieval system
