Branchiostoma floridae (Florida lancelet): 118412819
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Entry
118412819 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118412819
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118412819
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118412819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
YvrJ
ATG17_like
ATG14
zf-C3HC4_4
Sec10_N
Relaxase_C
AKNA
PEARLI-4
FliD_C
Fez1
DUF1664
UPF0242
Motif
Other DBs
NCBI-GeneID:
118412819
NCBI-ProteinID:
XP_035671750
UniProt:
A0A9J7MLL9
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Position
4:complement(15433483..15437638)
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AA seq
407 aa
AA seq
DB search
MSSEILKDISDEFLECQVCFRTYSRPKLLGCLHTFCETCLSDHVPEGTSEITCPSCSQTT
PLPQDGVSRLKDDSFISNLVATVGAKKRVIEGTGNIPCEGCEDKKTATSRCVVCNDFLCR
SCVTAHRKMKVFRGHLVVSFDDMKKGLFDESTELKNGPTCDIHEGEKIRFFCKTCEIPVC
HNCTVLDHSLPKHEISRLKSTSEDLRRDILHHINEATRHKSILDRKSHDLERKKADFHKK
HEEICHRLEKKFEELAQHIDQLKQKALEMTNTKAAIKMKEMDTMKEKVDSYRSRLSSGCT
YAENILTRGSDAEVAAAFHQMRESLSEGVRCSRRTEQYVPDLTTVWADVYEMELNRLLEE
VREVLWREDDEIAEMVQRTEGTFKFTVENFTSLQDTASRPTFFFNNF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaaatcttaaaggacatcagcgacgagttcttggagtgccaggtctgtttc
cggacgtacagccgacccaagctgctcggctgcttgcacaccttctgtgagacctgttta
tcggaccacgtgcccgaagggacgtctgaaatcacgtgcccttcatgctcacagacaacc
cccctcccccaagatggcgtgtcccgactgaaggacgactccttcatatcaaatcttgtg
gcgactgttggtgcgaagaagagggtgatagaagggacagggaatattccgtgcgaaggt
tgtgaggacaaaaagacggcaacttcacgatgcgtcgtctgcaacgacttcttgtgcagg
agctgcgtcaccgcccaccgcaagatgaaggtcttcagaggtcaccttgtcgtcagtttc
gacgacatgaagaagggtctgttcgatgagtctactgagctgaagaacggcccgacctgc
gacatccacgagggggagaagatacggttcttctgcaagacgtgtgagataccggtctgc
cacaactgcacggtcctggaccacagtctccccaagcacgagatcagcaggctgaagtcc
acgtcagaggaccttcggcgggatattctgcatcacatcaacgaagcgacccgccacaaa
agcatcttagaccgcaaatcacacgacttggaaaggaagaaagccgatttccacaagaaa
catgaagaaatctgtcatcggctagaaaagaagtttgaagagttggcgcaacacatcgac
cagctcaaacagaaagcgctggagatgacgaataccaaggccgccatcaagatgaaagag
atggacaccatgaaagaaaaagtcgactcctacagatccagactcagcagtggctgcacc
tacgcggagaacattctgaccagaggttctgacgcggaagtcgccgcggcatttcaccag
atgagggagagtttaagtgagggagtgaggtgctcgcgccggacggagcagtacgtccct
gacctgaccacggtctgggcagatgtgtacgagatggagctcaacaggctgctggaagaa
gtcagagaggttctgtggagggaggacgacgagatcgcagagatggtgcagcggacggaa
gggacgttcaagttcacggtggaaaacttcacgtctctccaggacaccgccagcaggcca
accttcttcttcaacaacttc
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integrated database retrieval system
