Branchiostoma floridae (Florida lancelet): 118413729
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Entry
118413729 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118413729
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118413729
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118413729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-CHY
TerD
zf-4CXXC_R1
zf_UBZ
ArfGap
Motif
Other DBs
NCBI-GeneID:
118413729
NCBI-ProteinID:
XP_035673151
UniProt:
A0A9J7KZJ2
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All DBs
Position
4:complement(28308787..28310235)
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AA seq
482 aa
AA seq
DB search
METATWTEEATDDSLKCTICDDTFKNPKVLPCSHNFCRECLRVWIGPEESDVNGRDTFPC
PRCRQPVPIPEHGVDGLKDNIFLANLVKAVAAHTKGRHGKDDILCTSCEEGKPATSRCSE
CAEFLCESCESAHRHLRDTKGHTLFTFEELKAGKYDDVFRGRKAPPCSKHPGEIVKLYCR
TCETPICFECASFEHRDSRHNYTRIEEVASERREAMLDLTPQCQARIAFFHKTEEAQKRL
KKQLQLNAEGARQNVQTQLTLVKEECERLQTCINAEETAKKQQIDAEIEGAQISLARAKS
TCEFAETLAREGGDYEVVSCSQDMTTRLNDFTKPWPPAVTVDSELANINVDYSTLNQTLT
KHSQQYHQSTSDNKETFANNTEVRKSTSGVPADQVVSPKLPQPRRDNIMTRSRKRSKALA
RQQKEATSERENALTRPMKETRSRAVPASNTRKRGLSTASDSSPPASQKKACGTHVDGDT
TI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagactgccacttggacggaagaagccacagacgactcactgaagtgtacgatctgt
gacgatacctttaagaatccgaaggttcttccctgctctcacaacttctgtcgggaatgt
ctgcgggtatggatcggcccggaggaatctgacgtgaacggtcgcgacacatttccctgt
cctagatgtcgacaaccagtcccaatccccgaacatggcgtcgatggtcttaaggacaac
atctttctggctaacttggtgaaagctgtggcagcgcatacaaagggtcgccacggtaaa
gatgacatcctctgcaccagttgtgaggaagggaagcccgccacgtcccggtgttcggag
tgtgcggagtttctgtgtgagagttgtgaatcggcacaccgtcatctgagagataccaag
ggccacacgctcttcacttttgaggaacttaaagcgggaaaatatgacgatgtcttcagg
ggtagaaaagctccaccgtgctccaaacatccaggagaaattgtgaagctctactgtagg
acctgtgagaccccaatatgcttcgaatgtgcctcgtttgaacacagggactcacggcac
aactacacgcgcatagaagaggtggcttcagagaggagagaggcaatgttagatctcaca
ccacagtgccaggctcgaatagcgttttttcacaagacggaagaagcacaaaaacgcttg
aagaaacagcttcagctgaacgcagaaggagctcgtcagaacgtacaaacacaactcact
ctagtcaaagaagaatgcgaacggctacagacctgtattaatgcagaagaaacagccaaa
aagcaacagattgatgcagagatagagggagcacagatcagtttggcaagagccaagagc
acatgcgagtttgcagagactctagctcgggagggcggcgactacgaagttgtatcttgc
tcacaggatatgacaacgagactgaacgactttactaaaccatggccacctgcagtcaca
gtggactctgaacttgcaaacataaacgttgattactcaactctaaaccaaacgttgaca
aaacacagccaacaataccatcagtccacttccgacaacaaagaaactttcgccaacaac
actgaggtcagaaagagtacctccggggtaccagctgatcaggttgtcagtccgaagtta
ccacagccaagacgtgacaacatcatgaccaggagccgaaaacgatctaaggccctcgct
cggcagcagaaggaggcaaccagcgaacgagagaacgccctgacgaggccgatgaaggag
acgaggagccgtgcggttccagccagcaacacgaggaagagagggctgagtacggccagc
gattctagtcctccggcatcgcagaagaaggcgtgcggaacacatgtggacggggacacc
accatctga
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integrated database retrieval system
