Branchiostoma floridae (Florida lancelet): 118415111
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Entry
118415111 CDS
T01074
Name
(RefSeq) plexin-A1-like
KO
K06820
plexin A
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
PSI
Sema
TIG_2
TIG_plexin
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
118415111
NCBI-ProteinID:
XP_035675365
UniProt:
A0A9J7MQ74
LinkDB
All DBs
Position
5:21397864..21495570
Genome browser
AA seq
1929 aa
AA seq
DB search
MERLNLLPGFLLLYSVVLQLVTVVQGLHIYRTFTPPDVILNHLSVDNQTGKVYIGAVDNL
YQLNRQLDVEKTVSTGPRLDSVNCPGPAEGDTTCPDRVDTSNVNKILAIDQQGGHLITCG
TVYQGICQVRNLRDISQISVSYTPDFTKYVATNSPSRTTVGFVAPGPQPFEENALYVGST
YGEHNDDIVIRENVPAVSIRSLQSSTIFQVMNNGEAKFVVNPTELRQQYLISYIHGFSSK
NRVYFATVQMETVPKPGFDPPSYWSKLTRLCLGDVNFYSYMEIPLKCQGQNGTNYNLLQA
VYVSKPGQKLAESMGLPDDDEVLFGVFSASKTPSGTEPLDSSALCVFSMSEVNEEFGKVQ
EACYTGGEGGDGIAKPLEFAGGTICTSFQSQIMESYPCGDSFTPKQFGGTVPLTRTAVAE
FPTTGLTSVAASTVNDYTAAFLGTTNGQLIKVLVWSGVAADPYEQITVVSGSRVQQDMQF
DAIDPQHLYVMTENKVSQVKVAECGQYNSCEECHGAGDPYCGWCTLENRCTQKQECNGHN
EVNRWLSVDVDRCIEITQIDPPNLPREGPRTSLTLEVARLPDGGQTYDCSFRLNAATTFT
SPARFDNNGKLVCDETPPPAQIPPIPVGRDHVTVDLWVRVRETLRDIVKAGFDFFDCNAL
KSCNPCVTSSYNCNWCVSDNKCTHNIGDNCQDGGTTVGHGERNSCPLIVALGSVELIPVG
LPKAINMSTRNVPGNANDFRCSLNINGVYVTAEATFRNGIISCSPKQYTYPQDVQELAVA
LGASWRGNNIIDNPLGVTVTLYKCSSQRTDCSLCVTAPPRYSCGWCEDTCTVREECQNRG
DRWELENCPAPIITDFAPKSGPVNGGTNVTITGVNMGQRFTDINTGVTIAGQACRPIEDQ
YSISNKIVCTTGQAMTTTSGPVVVQVGVQANQQGQSSDIFYYRDPTVTGFRPEVGPQSGG
TRVFIEGELFDTGGKITARIGRPGTGENMWALCIVDEASRTNVSVECQTGHIDATGQYTL
QVLFDGHPRDAPGKFNYTDDPTIVEVSPLKSFTSGGRQLTVRGTNLRIVQDAAVRVSTST
ATRRKRQATEASMPCKIESDSLMKCPSPNMGDSVGDVDLTFQLDNVQISLASLPGCQDSP
ASCKFVYVPDPEYFPFEENPKQHTGGILAIEGRNLDQASFQDDVQVTIGMEICNVTSLDD
DTLTCEPPESQPPGLDSEGRKSKEVLPIVVVRVGNLKFEIGELQYQIAPAGLVFWAIILI
AAAGGFLVLIIIALLFIMRSKKKEANRRYEKIMVQMDTLESNVRNECKKAFAELQTDMTD
LTSDLGGTGIPFLDYRTYMMRVLFPGQDMHPVLKETNVRESRRVQWEQAMNQFSALLNNK
HFLLTFIRIMEESRESFSSRDKVNVASLLTVALHGKMEYYTDILKTLLLHMIEKSVERNP
KLMLRRTESVVDKMLTNWLSISLYPFLKETAGQPLFMLYKAIKYQVEKGPVDAILGFARY
SITEDRLLREQVDHEVLTLNVVSLPGGPSGHLPFTVKALSCDTITQVKDKILDMAYKNIP
YSTRLHADECELEWRHGRAGQLILRDTDVTSEMNHRWKKLNTLEHYKVPDSCSVALLRKP
EQQMKLDRTFGKNADKNLGVNQSLSSSSLAPLMQGDPEEGCRYWHLQVEDSWVNDNFSNH
RNHKVKARDELERSNSVKRDSRFLKEQRAIPEIYLTRLLATKGTLQKFVDDAFSAILCTS
PVPPSIKYFFDLLDHEAKKHGIDDPETLHIWKTNSVPLRFWVNVLKNPEFVFDIFKLGIV
DACLSVIAQTFIDSCSAAEHKLGKDSPSNKLLYAREIPQYRQKVQTYYKEVQQMTAVSDQ
EMITLLVEETKDHTHEFNTLAAVNELYDYAMKYQDQLLDALEEDTTCQRMQLAHKFETIS
ANMEGETDV
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggagcggttgaatctgctgccaggttttctcctgctatactctgtggttctacagcta
gtgactgttgtccagggtcttcacatctacagaacatttaccccacctgacgtcatcctc
aaccacctgtcagtggacaaccagactggcaaggtttacattggagcagtggacaatttg
taccagttaaatcggcagcttgatgtagagaagacagtgtccacaggtccacggttagac
agtgtgaactgtcctggacctgctgaaggagacacgacatgtccagatagagtagacact
tccaatgtgaacaagattctggctattgaccagcaggggggtcatctgatcacctgtggc
acagtgtaccagggaatctgtcaagtgaggaacttgagagatatcagtcagatttctgtg
tcatacacccctgattttactaaatatgttgccactaattccccctcacggaccacagtg
gggtttgtggcacctgggccacaaccatttgaagaaaatgccctgtatgtgggaagcaca
tatggcgagcacaatgatgacattgtcatcagggagaatgttccggctgtttccatacgg
tcattgcaatcttctacaatcttccaagtcatgaataacggggaagctaagtttgtggtc
aatccaacagagctgaggcagcagtatttgatcagctacatccatggattcagcagtaaa
aaccgtgtctactttgcaacagttcagatggaaacagtcccaaagcctgggtttgaccca
ccttcatactggtccaaactcactcgactgtgcttaggagatgtcaacttttactcttac
atggaaatacctttaaaatgccagggccaaaatggaacaaactacaaccttttacaggct
gtgtatgtcagcaaacctggacagaaactggcggagagtatgggacttccggatgatgac
gaggtgctgtttggtgtgttttcagccagtaaaaccccatctggcacggagcccctggat
agctctgccctttgtgtcttctccatgtcagaagtcaatgaagaatttggcaaagtccag
gaagcctgctacacagggggagaagggggagatggtatcgctaaaccactagaatttgct
ggaggtacaatttgtacaagttttcagagtcagataatggaaagctacccctgcggggat
agcttcaccccaaagcagtttggaggaacagtccctctgacacgtacggctgtagcagag
ttccccacaactggacttacaagtgttgctgcttcaactgtcaatgactacaccgcagcc
ttcctgggaactactaatggccaactcatcaaggtgctggtgtggtctggagttgcagcc
gacccgtacgagcagatcaccgtggtctcaggaagcagggtgcagcaggacatgcagttt
gatgccatcgacccgcagcacctgtatgtgatgactgagaacaaggtttcccaggtgaaa
gtggcagagtgtggacagtacaactcctgtgaggagtgtcatggtgctggggacccctac
tgtggatggtgcaccctggaaaataggtgtacccagaagcaggaatgtaacggccataac
gaggtgaaccgctggctgtccgtggatgtggacaggtgcatcgagataacccagatcgac
ccgcccaacctgcccagggaaggacccagaaccagcctgaccttggaggtggcgcgtctg
cccgatggtggacagacctacgactgttcgtttcgcctcaacgcagcaacaacattcacc
agccctgcccgctttgacaacaacggcaagctggtgtgtgacgagacccctccccctgca
cagataccccccattcctgtgggcagagatcacgtcaccgttgacctgtgggtgagagtt
cgggagacactccgtgacattgtcaaggcggggtttgacttctttgactgcaatgctctg
aaatcgtgtaacccctgtgtgaccagttcgtacaactgtaactggtgcgtgtccgacaac
aagtgtactcacaacatcggtgacaactgtcaggatggtggcaccactgttggacatggg
gaaaggaactcctgtcccctgattgtggctctggggagtgtggagctcatacctgtgggc
ctgcccaaagccatcaacatgagcaccaggaatgtgccgggtaatgctaacgacttcagg
tgctcactgaacatcaacggtgtgtatgtcacggcagaagcaacattcaggaacggcatc
atctcctgttcccccaaacagtacacttacccccaggatgtgcaggagttggctgttgca
ttaggtgccagttggaggggcaacaacatcattgataaccctctaggcgtaacagttacc
ttgtacaagtgctcatctcagcgtacagactgtagcctgtgtgtgacggcgcctccccgc
tactcctgtgggtggtgtgaggacacgtgcacagttcgtgaggagtgccagaatcgaggg
gatagatgggagctggaaaactgccctgcgcccatcattactgatttcgcccccaagagt
ggtcctgtcaatggtgggacgaatgtgacgatcacaggcgtcaacatggggcagaggttc
actgacatcaatactggagtgaccattgctggacaggcctgtagaccaatagaagaccag
tacagcatctccaacaagattgtttgtactacagggcaggccatgaccaccaccagcgga
cctgtagttgtacaggtaggcgtgcaggctaaccaacagggacagtcctcagacatcttt
tactacagggaccccacggtgacaggtttccgaccagaagtagggcctcagtcaggaggg
acccgagtgttcatcgagggggagctgttcgacacaggcggcaagatcacggccaggatt
ggtcgtcctggtacaggggaaaacatgtgggctctctgcatcgttgatgaggccagcagg
actaatgtgtccgtggagtgtcagacaggccacatcgatgccacaggccagtacacgcta
caggttctgtttgacggacacccgagagatgcaccaggaaaattcaactacacagacgac
cccaccatcgtggaggtctcccctctcaagagcttcaccagtggaggacggcagctgaca
gtcagaggcactaacctacggattgtgcaggatgcagctgtcagggtgtccacctctaca
gcaaccaggagaaagagacaggctactgaggcctccatgccatgtaagattgagagtgac
agcttgatgaagtgcccctcccccaacatgggagatagtgtaggggacgtggacctgacc
ttccagttggacaacgtccagatcagtctggccagcctgccagggtgtcaggacagtcca
gccagctgcaagtttgtctacgtgccagatcctgagtacttcccgtttgaggagaaccca
aagcagcacacaggaggaatccttgccattgagggcaggaatcttgaccaggctagcttc
caggacgatgtgcaggtgaccattgggatggagatctgtaacgtgacttccctcgatgat
gacacactgacctgtgaacctccagagtcccagccaccggggctggacagtgaaggcagg
aagtcaaaggaagttctccccattgtagtggtaagagtgggtaatctgaagtttgaaatc
ggtgagctgcagtaccagatcgcgccagcagggctagtgttttgggccatcatcctgatc
gctgccgccggtgggttcctggtgctcatcatcatcgccctgctcttcatcatgaggagt
aagaagaaggaggccaacaggaggtacgagaagatcatggtgcagatggacacactggag
agcaacgtcaggaacgagtgcaagaaagcttttgcggagctgcagacagacatgacagat
ctgacctctgacctgggcgggactggcatcccgttcctggactaccgtacctacatgatg
agggttctgttcccgggacaggacatgcaccctgtgctgaaggagactaacgtgcgtgag
agccggcgtgtgcagtgggaacaggccatgaaccagttctcagccctgctcaacaacaaa
cacttcctcctgaccttcatcaggatcatggaggagagtcgggagagcttcagcagcagg
gacaaggtgaatgtggcatcactactgactgtggctctgcatggcaagatggagtactat
acagacattctgaagaccttactgctacatatgatagagaaaagtgtggaaaggaatcca
aaactcatgctcaggaggacagagagtgttgtggacaagatgctaacaaactggctgtcg
atttctttgtatcccttcctcaaggagacagccggccagcccctgttcatgctgtacaaa
gccattaagtaccaggtggagaagggcccagtggacgccatcctggggttcgccaggtac
tccatcacggaggacaggctgctgagggaacaggtcgaccacgaggtcttgaccctgaat
gtagtatccctgcccggtggtcctagtggtcacctgcccttcacagtcaaggccctgagc
tgtgacaccatcacacaagtcaaggacaagatcctggacatggcctacaagaacatcccc
tactccacacggctacatgctgatgagtgtgagctggaatggagacatggcagagcaggt
cagctgatcctgagggacactgatgtcacatcagagatgaaccacaggtggaagaaactc
aacacactcgagcactacaaggtaccagacagctgtagtgtcgctctcctgaggaagcca
gaacagcagatgaagctggacaggacgttcggtaagaatgccgacaaaaaccttggtgtg
aaccagtcactgtcctcctcgtccctggcaccactgatgcagggagaccctgaggagggg
tgtcgctactggcacttgcaagtggaggactcttgggtgaatgacaacttttccaaccac
cgtaatcataaggtgaaggctcgggatgagctggagcgctccaactcggtgaagagggac
agcaggttcctgaaggaacagcgtgccatcccggagatctacctcaccaggctgctggcc
accaagggaaccctgcagaagtttgtggatgacgccttcagtgccatcctgtgcaccagc
cccgttcccccctccatcaagtacttctttgacctgctggatcacgaggctaagaagcat
gggatagatgaccccgagactctgcacatctggaagacaaacagtgtgcccctgaggttc
tgggtgaatgtactgaagaacccagagtttgtgtttgacatcttcaagttgggtatcgtg
gatgcctgtctgtctgtcattgcacagacttttatagactcctgttctgcagcagagcac
aaactgggcaaggactccccctccaacaagttactgtacgcacgtgagatcccgcagtac
cgacagaaggtccagacgtactacaaggaggtgcagcagatgacggctgtcagtgaccag
gagatgatcaccctgctggtggaggaaacaaaagaccacacccacgagttcaacaccctg
gcagcggtgaatgagctgtatgactatgccatgaagtaccaggaccagctgctggatgct
ctagaggaggacaccacctgccagcgaatgcagctggctcacaagtttgagactatctca
gccaacatggagggagagacggacgtctga
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