Branchiostoma floridae (Florida lancelet): 118420303
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Entry
118420303 CDS
T01074
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118420303
Membrane trafficking [BR:
bfo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
118420303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
DUF4800
Motif
Other DBs
NCBI-GeneID:
118420303
NCBI-ProteinID:
XP_035682932
UniProt:
A0A9J7LI72
LinkDB
All DBs
Position
7:13357711..13509756
Genome browser
AA seq
3213 aa
AA seq
DB search
MSTQAASVTGLAAQLGLQAGGGGSGAATDVQMKTTKMKFAVLIGLIQVGEVSNRDILETV
LNLLVGGKFDLEVNFIIKEPESILHMLELLDNCSTTLQAEIWSMFNAILRKSTRNLQACT
EVHLIEKILQKLPSTDDMIAGEDKFYLLVDLLGVLASYSITVKELKILFGMLKGDKGTWP
VHAVKLLKVLRQMPQRHGPDTFFNFTGRHGSAIALPPLAKWPYQSGFTFNSWFRMDPLNT
INVDRERPYLYCFRTSKGVGYSAHFVGSCLIVTALKAKGKGFQHCVKYDFQPRKWYMVTI
AHIYNRWRNSELKCYVNGKLVSFGDMAWHVNTSDTFDKCFLGSSETADADRVFCGQMGAV
YVFGEVLSAHQVSAIYQLGPGYMNQFRFESESDLLLSETHKKCLYDGKLSSCIVFTYNPK
ATDAQLCLESSPRGNPSFFVHSPHALMLAVSTASKVVLDVRAIVTQSIHSALHSIGGIQV
LFPLFAQLDHVQQNGELDYSVCSMLLGLLSDLLQSSVRTQQQMIQAKGFLVIGYLLEKAT
RKHITIQVLDSFLQLAKYLASLPTGGPLLRNLLDHILFNPTIWIYTPAKVQMALYTYLAT
EFVQSANIYNNIRRVSTVLQLMHTLKHFYWVVNPQDRSGIAPKGMDGPRPTQNEVKSLRA
FMLLFMKQLILKKHPSPLPLPIQDQGVDEDELQAILNYLLTMHEDENLHDILQLLVALMS
EHPSSMIPAFDKRNGVRVIFKLLASASEGIRVQALKVMGYFLKNTNAKRKNELMQAHSLF
TLLGDRLMLHTDTLSMTTYNALYEILTEQVCTQVLHVPHPEPDSSCRVHNPMIMQVVARL
IKNSRATEKVLEVKKLFLSDMIKLFNNSRENRRTLLQCSVWQDWMFSLCYIHPANKDEQK
VTEMVYSLFRMLLYHAMKYEYGGWRVWVDTLAIAHSKVSFENHKNQLAKAYEQYQKFDLE
HGEVRSISAMSEKGTGTPPGVSPVRIVTSFPKTSSSGKTDQQAAADSSATAPSGTKSVTA
DGNAEGSNSQANDVGGTANGVTSNVESTDKKDTATNGIVEQPNEVGTKSSNKTEIAATSD
GTTEVAKVQASTVVSTTQSTNSSNENVLVNGELSPVSPIQKGIITLSQSIAGSGSQGSGD
SSKPELQNLDNKATKAPANKEAASFLNSVIDNVVSRLATTETDWLSGKNLEELSTEDVAK
EVAAALKQSRGSEKISDKAMQDTSAIDKVAGVEENGTTEQCSVADGQVKTVTEPNVHVET
TSEPPAVPDAVQDGVESSAISNEKPPSEEVRTKEETVAASPISNEHSTEQAKETNVADTG
AKTEDVNSEVKNSNNEAKNEASTDGLTPQSTSAVEAPSSTEAKTAATPAATNGAEAAPSS
EKEKSAASSEPSAATTTTAGATATAASATTTAATTAASTAGTQAEATVSPSQQPTSPASG
TGSQKSQGSPGQQFSPGPRTSMFRIPEFSWSPMHQRLLSDLLFSLETDIQVWRSHSSKTV
IDFVNSSENAIFVHNTIHLVSQLCDNLIIACGGILPLLASATSPSYELDVIEPSQGLTIE
AAISFVHRLMNLVDVLVFASSLSFAELEVEKNMSSGGILRQCLRIICCCAVRNVLECRQK
EKPSANGATIAAPDLREKNLQSLLRGAQEIAKGTGTARDPSAPFSEFSPTNFQFLNPQGP
NNHPTNLAVQNLVENMAGLPGVVSMVTDAERLLQDMDINRLRAVVYRDVEDSKQAQFLCL
AVVYFISVLMVSKYRDILEPTHPDLSPSEPYRRTRSAVNSPTGQPANFGNASWRAMHAAN
HQVMEGATTGKVGTASEGGATSAASNAKENSRLEQKNDAIKKTAEVKDVAAVPEQSSANT
KNESESAKDTSGMVTSAKEISPSVLETRPSPESQYEGLDFETNVFTSENTQTLLNKERML
EDDTPKDSMQVTQDKKEEDKKESPKPTEPSVQPTEVKPETTVTETTEEVQDQPLPVKEDK
FEEIPLEEQGAAAPVTATEVKTQCVDEKKEEEDSLPTPSHVAALLRKLKAMSAEQDDKPD
EEVIQAQYSPTSVVYEVTEEPHTKPAVNTKPVKWNSFDRSIVRHEPPVMNTNGISSSKTE
STDQAVVIPRPPPQMGMSGGMRTRSQSTPSGFGPGSGLPRPHSFHSGFPERHNDTVTSKL
ERSLETVAPLLREIFLDFAQFLSRTLVGSHGQELLIEGLVCMKSSTSVVELVMMLCSQEW
QNSIQKHAGLAFIELINEGRLLSHAMKDHLVRVANEAEFILNRQRVEDVQKHAEFESICA
QHALERQEEEKMCDQLISAARRRDQVTATQLRQKIMNILTSKHGAWGSPKQEQPRQFWKL
DYWEDDLRRRRRLVRNPHGTTHPEATLKAALEHGAPEDAVSQARQAFHKEVAAMKGRDYE
ILDPEELLLEEKELDELAGPVAFSTPCSLIAPAVVAKGTLSITAAELYFEVDEEDPSYKK
LDPKILLYTESIHGKWHFHDIVAIFSRNYLHQRTALEIFFANRSSVMFSFPDQATVKKVV
YALPRVGVGVNYGLPQARRVSLATPKQLFRMSNMTARWQRREISNFEYLMFVSTIAGRTY
NDLNQYPVFPWVLTNYESEELDLTLPSNFRDLSKPVGALNPKRRSFFQERYEAWDDPDVS
AFHYGTHYSTAGFVLNFLIRLEPFTTMFLNLQGNKFDHANRTFSNILQTWRNCQRDTSDV
KELIPEFYYLPEMLMNMNGYNMGTMEDSRPVDHVVLPAWARTPEEFIRLNRMALESEFVS
CQLHQWIDLIFGYKQKGPEAIRATNMFYYLTYEGSVNLDSISDPVMKEAIKDQIKSFGVT
PCQLLTEPHPPRSSAMHLTPMMFTDMRTNDVLVALKFPSNSPIIHLTANTHPHVPIPAVT
TVTANLLFSINKWNASAATFRGAPGYSLEPNQYAIEVDPLILAGTGVHRRQVNDILDQSI
QLNSCCCRLTSDNRHILICGFWDKSFRIYSTDSGRLLQVVYGHWDVVTCLARSECYIGGD
CYIVSGSRDATLLLWFWSSRLQAITGEPHNSNRVERAIPKTIMTGHETEVLSACVSAELG
LVISCSRGGPVLVHTINGDLLRSLDPPEFCVNPTLVKMSCEGQVVVSYDKGHLSLFTFNG
KFLRAMELNDNILSMVLSADGQYLVTGGDNRIVEVWQTSNFKLLYTFPGVDSSVRALDLT
HDQKTVLVGLSSGSLVAFNIDFNRWHYEFQARY
NT seq
9642 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccaggcggcgtcggtgacgggtttggccgcgcagctcggcctgcaggccggc
ggtggagggtcgggtgctgcgaccgacgtccaaatgaaaaccaccaagatgaaattcgct
gttctgatcgggctgatccaagtcggagaggtgtccaaccgagacattctggagactgtg
ctcaacttgttggtgggagggaagtttgaccttgaggtgaacttcatcattaaggagcct
gagagcatcctgcacatgttagaactgctggataactgctcaaccacactgcaggctgag
atctggagcatgtttaacgccatcctgaggaagagcaccaggaacctccaggcctgtacg
gaggtccatctcatcgagaagatcctacagaagctgcccagcaccgacgacatgatagca
ggtgaggacaagttctacctgttggtagacctgctgggtgtgctggccagttacagcatc
acagtcaaggagctcaagatactgtttggtatgctgaagggagacaagggcacttggccc
gtacatgcagtcaaactgctgaaggtgctgaggcagatgccacagagacacggaccggac
actttcttcaacttcaccgggagacatggctctgccattgccctgccaccactggccaag
tggccataccaaagcggcttcacgtttaacagctggtttcgcatggatccgcttaatacc
ataaacgtggacagggagagaccgtacctttactgtttccgtaccagtaaaggggtggga
tattcggcgcactttgtcggctcgtgcctgattgtcacagctctgaaggccaagggcaaa
ggtttccagcactgtgtgaagtacgactttcagccaagaaagtggtacatggtgaccatc
gcacacatctataaccgctggagaaatagtgaactgaagtgctacgtgaacgggaagctg
gtgtcatttggcgatatggcctggcacgtcaacactagcgatacgtttgacaagtgtttc
ctgggttcgtcggagacagcggatgcggaccgtgtgttctgtgggcagatgggagctgtg
tacgtgtttggggaggtactgagtgctcaccaggtctcagctatctatcagttaggacct
ggatacatgaaccagttcaggtttgagtcagagagtgacttgctactctcagaaacccac
aaaaagtgtctgtatgatggaaagctgtcctcctgtatcgtgttcacctacaaccccaag
gccacggacgcgcagctctgtctggagtcatcaccgcgtggaaacccgtccttcttcgtg
cactccccccacgcactgatgctggccgtcagcactgcgtccaaggtcgtgctggatgtt
cgagccatagtgacccagtctatccacagtgctctacactcgataggtggcatccaggtt
ctgttcccattgtttgctcaactggatcatgtgcagcagaatggagaattggactacagt
gtgtgttccatgctgctcggcctgctgtctgacctcctgcagagttcagtgcggacccag
cagcagatgatccaggctaaaggcttcctggtcattggctatctactggagaaggcaacc
cgcaagcacatcaccatccaggtgttggacagttttctgcagctggcaaagtacctggcc
tccctgccgacaggtgggccgctcctgcgcaacctgctggaccacatcctcttcaacccc
accatctggatatacacaccagccaaggtccagatggccctgtacacgtatctggccaca
gagtttgtccagtcagccaacatctacaacaacatccggcgggtcagcacggtactgcag
ctgatgcacacgctcaagcacttctactgggtggtcaacccccaggacaggagcggcatc
gcacccaaggggatggatggccccaggcccacacagaatgaagtgaaatccctcagagcc
ttcatgttactcttcatgaaacagctgatacttaagaagcacccgtctcccttgcccttg
cccattcaggatcaaggagtggacgaagatgaactccaagccattctcaactacctgctc
actatgcatgaggatgagaacctgcacgacatcctgcagctgctggtggcgctcatgtct
gaacatccttcatccatgatccctgcctttgacaagaggaatggtgttagggttatcttc
aagcttctggcatcagctagtgaaggcattagggtacaggctctgaaagtcatgggatac
ttcctgaagaacaccaatgcaaaaaggaagaatgagttgatgcaggcccacagcctcttc
accctgctgggggatagactcatgttacacactgacactctcagtatgacgacatataat
gctctgtatgagatcctgacagaacaggtgtgcacacaggtgttacatgtgccccaccct
gagccggactcctcctgtagagtacacaacccaatgataatgcaggtggtggcacgactg
attaagaactccagagctacagagaaggttctggaagtgaagaaactcttcctgtctgac
atgatcaaactcttcaacaacagcagggagaacagacgcaccctgctgcagtgttccgtg
tggcaggactggatgttctccctgtgttacatccaccctgccaacaaggatgagcagaag
gtgacagagatggtgtactccctgttccgcatgctgctgtatcatgccatgaagtacgag
tatggaggctggcgcgtatgggtcgacacactcgctatcgcacattccaaggtgtcgttt
gagaaccacaagaaccagctggctaaagcctacgagcaataccagaagtttgacttggag
catggagaagtcagaagcatatcagccatgtctgagaaaggaaccggcacccccccaggg
gtcagccctgtgagaattgtgacatcttttccaaagaccagcagctctgggaagacagac
caacaggcagctgctgacagtagtgcaacagcgccctctggcacaaaatccgtaactgca
gatggcaatgcagaggggagcaatagtcaggccaatgatgttggtgggacagcaaatgga
gttacctcaaatgttgaaagcactgacaaaaaagatacagctacaaatgggatagtagaa
caacccaatgaagtaggtaccaagtcatctaataaaacagaaatagctgcaaccagtgac
ggcacaacagaagtagcaaaggttcaagcaagcactgtggtctcaaccacacagtcaaca
aatagtagcaatgaaaatgttcttgtgaatggggagttaagtcctgttagccccatacaa
aaaggcatcataactctatctcagagcatagcagggtctggaagtcaaggaagcggagat
agtagcaaaccagagctacagaacttggacaataaggccactaaggctccagcaaataag
gaagcagcatctttcctgaattcagtcatagacaacgtggtgtcaaggttagcaaccaca
gagacagactggctttcgggaaagaacttggaggaactgtccacggaggacgttgcaaag
gaagttgcagctgcactgaaacaaagccgtggcagcgagaagatttctgacaaagctatg
caagacacaagtgcaattgataaagtggctggcgtggaagaaaacggaactacagaacag
tgtagtgtagcagacggccaggtcaaaactgttacagagcccaatgtccatgtggaaacc
acatcggaacccccagcagtgccagatgcagtgcaggatggggttgaatctagtgccata
agcaatgaaaaacctccctcagaagaagtcaggaccaaagaggaaacagttgcagctagc
cctattagcaacgaacattctacagagcaagctaaggagactaatgtggcagatactggt
gctaagaccgaggacgtgaattctgaagtaaagaacagtaataatgaagctaaaaatgag
gcctctactgatggtcttacaccacagagtacatctgctgtagaagccccctctagcaca
gaagcaaaaactgcagccacacctgcagcaaccaatggagcagaagcagctccctctagt
gagaaagaaaaatctgcagcttcttcagaaccatctgcagctactaccactactgcagga
gctaccgctactgcagcttctgccaccactactgcagcaactactgcagcatctactgca
ggcacacaagcagaagctacagtgtctccatcgcagcagcccacaagccccgcctcgggg
acagggtcacagaagtcccagggttccccggggcagcagttcagcccaggcccacgaacc
agcatgttccgtatcccagaattctcctggtcacctatgcaccaacggctgctgtcagac
ctgctgttctcgttggagacagacattcaagtgtggaggagccacagctccaagacagtg
atagactttgtcaactccagtgagaacgccatcttcgtgcacaacaccatccacctggtg
tcccagctgtgtgataatctcatcatcgcctgtggggggatcctgccactgctggcctct
gctacctcaccttcttatgagttagacgtgatagagccgtcccagggcctgaccattgag
gctgcgatatcgttcgtccaccgtctgatgaacctggtggacgtgttggtgttcgccagc
tcgctgagctttgctgagctggaggtggagaagaacatgtcatcaggaggcatcctcagg
cagtgtctccgcatcatctgctgttgtgcagtgagaaatgtgctggagtgtcgtcagaag
gagaaaccctctgccaacggggccaccatcgcagcccctgatctgagggagaaaaaccta
cagtccctcctacgaggagctcaagaaatcgctaagggtacaggcactgccagggacccc
tctgctccattctcagagttcagtcccaccaactttcagtttctcaatccacagggcccc
aacaatcatcctaccaatttggctgtgcagaacctggtggagaacatggcggggttgccg
ggcgtggtctccatggtgacggatgcagagcgactgctacaagacatggacatcaacagg
ctacgggctgtggtctatcgagatgttgaggatagcaagcaagcccagttcctctgcctg
gcagtggtgtatttcatctcagtcctcatggtgtccaaatatcgtgacatcctagaaccc
acgcaccccgacctgtccccgtctgagccctaccgtcgcactcgcagtgccgtcaactct
cccacgggacagcctgctaacttcggcaacgccagctggagagcaatgcatgctgcaaac
catcaggttatggaaggtgccactactgggaaggtggggacagcttctgagggaggggca
acatcagcagcaagcaatgcaaaggagaatagcagattagaacaaaagaatgatgcaata
aagaaaacagctgaggtaaaagatgtagctgcagtaccagagcagtcatcagcaaataca
aaaaatgaatcagaaagtgcaaaagatacgtcaggaatggttacaagcgcaaaagaaatt
tcccccagtgttctagaaacccgcccaagcccagaatcacagtacgaaggactggatttc
gaaactaatgtttttaccagtgaaaacactcagacactactcaacaaggagagaatgctg
gaagatgatacaccaaaagattcaatgcaagttacacaagacaagaaggaggaagataag
aaagaaagtccaaagccaacagagccatctgtgcagcctacagaggtcaagcctgaaaca
acagtaacagaaacaactgaggaggtacaagaccaaccattgcctgttaaagaggacaag
tttgaggagataccacttgaagaacagggggccgcagcacctgtcactgccacagaggtg
aaaacacagtgtgtagatgagaaaaaagaggaggaagattccctgccgaccccgtcacac
gtggctgcgttgctacggaaactaaaggccatgtccgcagaacaggacgacaagcctgac
gaggaggtcatacaggcccagtacagccccacatctgtggtatacgaggtgacagaggaa
ccccacaccaaacctgccgtcaacaccaagcctgtgaagtggaactccttcgacaggagc
atcgttaggcacgagccgcccgtcatgaacactaacggcatcagttcaagtaagactgaa
tctacagatcaagcagtggtgatccccagaccgccccctcagatgggcatgtcaggaggt
atgaggacccggtctcagtccacaccgtctgggtttggtcctggttctggtctgcccagg
cctcatagcttccactcaggtttccctgagaggcacaatgacacagtgacgtccaagctg
gagcggtcgctggagacagtggcaccactgctgagggaaatcttcctggactttgcccag
tttctgtccaggacactagtggggagccacgggcaggagctgctcattgaaggtctggtg
tgtatgaagtccagcacatcagtagtggaacttgtcatgatgctgtgttcacaggagtgg
cagaactctatccagaagcatgcaggcctggcattcatcgagctcatcaatgagggaagg
ttactctcccatgccatgaaagaccacctggtccgagtagcaaatgaagctgagttcata
ctcaacagacagagggtggaggatgtccagaaacatgctgaatttgagtccatctgtgcc
cagcatgctctggagcgtcaggaggaggagaagatgtgtgaccagctgatctcggcagca
cgccggcgggaccaggtcaccgccactcagctccgacagaagatcatgaacatcctcacc
agcaagcacggggcctgggggtctcctaaacaagaacagccgcggcagttctggaagtta
gactactgggaggatgacctgaggcggcggcgcaggctggtgcggaaccctcacggcacc
actcaccccgaggccaccttaaaggcagccctggaacatggtgcaccagaagatgcagtg
agccaggcacgacaggccttccataaggaggtggcggccatgaaggggcgggactacgag
atcctggatcctgaggagctgctgctggaggagaaggagctggatgagttggctggtccc
gtggccttcagcactccctgcagcctgatagctccagcggtggttgccaagggaacgctg
tcaatcaccgcagccgagctgtactttgaagtggacgaggaagatcccagctacaagaaa
ttggaccccaagatcttgctgtatacagagagcatccatggcaagtggcacttccatgac
atcgtggccatcttctcacgcaactatctccaccagaggacagcactggagatcttcttt
gcaaacagatcctccgtgatgttcagtttccctgaccaggccacagtcaaaaaagtggtg
tacgccctccccagggtaggggtgggagtcaactatgggctgccacaggccaggagagta
tccttggcaaccccaaagcagctgttccgtatgtccaacatgacggcccgctggcaacgc
cgcgagatctccaacttcgagtacctgatgtttgtcagcacgatagctggtcgtacgtac
aatgatctgaaccagtatccggtgttcccgtgggtgctgaccaactatgagtcagaggag
ttggaccttacgctgccgagcaacttccgcgacttgtcaaagcctgttggagctttgaac
ccgaagcgccgatcgttcttccaagagcggtacgaggcttgggatgacccggacgtctcg
gctttccactatgggacacactattccactgcaggctttgttttgaacttcctcatcaga
ttagagccgtttaccacaatgttcctgaatctccaaggcaacaagtttgaccatgccaac
aggaccttctctaacatcctacagacatggagaaactgccagagagacacatcagatgtc
aaggagctcataccagagttctactacctgccagaaatgctaatgaacatgaatgggtac
aacatgggcacaatggaggatagtcggccagtggaccacgtggtgctaccagcatgggcg
aggactcctgaggagttcattaggttaaacaggatggctctggaatctgaatttgtatct
tgccagcttcatcagtggatagacctaatttttggatacaagcagaagggtcctgaagcc
atccgtgcaaccaacatgttctactacctgacgtacgagggtagtgtgaacctggactcc
atctcagatcctgtcatgaaagaggccattaaggaccagatcaagagttttggtgtgacc
ccctgccagctgctgaccgagccacacccgccccgcagctcagctatgcatctgaccccg
atgatgtttaccgacatgaggacgaacgacgttctggtggcgctcaagttcccctccaac
tctcccatcatccacctcaccgccaacacgcacccccacgtccccatccccgctgtcacc
acggtaaccgctaacctcctcttctccatcaacaagtggaacgcgagcgctgccaccttt
agaggagcaccagggtactctctggagcccaaccagtatgccatagaggtggaccccctc
atcttggcggggacgggggttcaccggcgccaagtgaacgacatcctggaccagagtatc
cagctgaactcctgctgctgcaggctcacctccgacaacaggcacatcctcatctgtggc
ttctgggacaagagcttcaggatatactccactgactcaggccggctgctgcaggttgtg
tatggccactgggatgtggtgacatgtctggccaggtcggagtgttacatcggcggggac
tgctacatcgtgtctgggagcagggacgccacgctgctgctgtggttctggagctccagg
ctacaggccatcacaggagagcctcacaacagcaacagggttgaacgtgccattcccaag
accatcatgaccggccacgagacagaggttttgagtgcctgtgtgtccgcagagctgggc
ttagttatcagctgctcaagaggtggtccagtcctggtgcacaccatcaacggagacctg
ctgcgctcgctggatcccccggagttctgcgtgaatccgactctggtcaagatgtcgtgc
gagggtcaggtggtggtcagctacgacaagggccacctgtccctcttcaccttcaacggg
aagttcttaagggccatggagctgaacgacaacatactgtcgatggtactgagtgcagac
ggtcagtacttagtgacaggaggagacaacaggatagtggaggtttggcagaccagcaac
ttcaaactcctctacaccttccctggtgtggacagcagtgtcagggccctcgacctcacg
cacgaccaaaaaactgtactagtaggtctgtcatcaggcagtctggtagccttcaacatt
gacttcaacaggtggcactatgagttccaggccagatactag
DBGET
integrated database retrieval system
