Branchiostoma floridae (Florida lancelet): 118423967
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Entry
118423967 CDS
T01074
Name
(RefSeq) RING finger protein nhl-1-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118423967
04121 Ubiquitin system [BR:
bfo04121
]
118423967
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118423967
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118423967
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118423967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
SBBP
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
118423967
NCBI-ProteinID:
XP_035688200
UniProt:
A0A9J7N0H1
LinkDB
All DBs
Position
10:complement(785086..790930)
Genome browser
AA seq
711 aa
AA seq
DB search
MEQQIEQLLTCPVCLDRYKRPKILPCQHTFCQDPCLQQLADPVRRKVKCPECRAMHNIPP
KGISGFPNNITILKFLDLPAEAQFSSRTESCQVCRRSTAISKCFHCPKRLCDACKKAHAG
QLKLDIGQQISLIWRELPKLTEAVNIVEKTATHIKQSGEMVKMDIKSSIDQNIRKLRERE
QILLNEVDLFLQSELRLLKVKQENLEVELASIASHCDSAESKITESSPSAVNDVTDAELL
NFHKQGKEYLIQLQNTTIDTAVDDCKTVKFTLQNSQTLHSNIATLGELSSSAFVINTVNP
NSSSNAPVRNPRASLSNEAFRGHPAVEMFRTSSQLHATPPVLRHSPRTVSVSPQVPSPQP
ANSTPSPAQSNSVAGRVSHISTTSRSEQNRARANNNNGSLEFTSYDVPLNDIVSDFSRVQ
RRSPTSAFYRTKGLIQTKFGSKGSDLGHFTWPRGVAVSPENYIIVADSSNHRVQVFTPNG
QLVRVFGSYGTGEGEFDCLAGVTVNSQGWIVTADRYNHRVQIFDSNGRFIRQFGQEGSRD
GQLSYPWGVATDRMGFIYVCDKDNHRVQVFRLDGAFVRKFGRLGNGNGQFENPHYIAVAR
DNKVIVSDSSNHRIQVFDKYGRFVLKFGSEGSGNGQFKYPRGVAVDQEGHIIVGDSGNNR
LQVFRQDGSFLCAFGTWGSGDGEVKGLEGVALMSRGNVVVSDRENHRIQVF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagattgaacagctcttgacgtgtccagtgtgtttggatcgttacaagagg
cccaagattctcccctgtcagcacaccttctgtcaggacccctgcttacagcagctagcc
gatcccgtccgacggaaggtcaagtgtccggaatgccgtgccatgcacaacatacccccc
aaggggatctccggcttccccaacaacatcacaattctcaagttcctagacctgccggcg
gaggctcagtttagctcgcgcacagagagctgtcaggtgtgcagaagatcgacggccatt
tcaaaatgttttcactgtccgaagagattgtgcgatgcctgcaagaaggcacacgccggc
caactgaagctggacataggacaacagataagcctgatttggagagagttaccaaagttg
acagaggcggtaaatattgtggagaagacggcaactcatatcaaacagagcggagagatg
gtgaagatggacatcaaaagttctatagatcagaacatacggaagctccgagagcgagag
cagatactgttgaacgaggtggacttgtttctgcagtcggagttacgcttgttgaaagtg
aaacaggagaaccttgaagtggagctggccagcattgcgagccattgtgactcggctgaa
tcaaaaataaccgaaagcagtccaagtgctgtaaatgatgtcaccgatgcagaactgctc
aacttccacaagcagggtaaggagtatctcatacagttacagaacacgaccatcgatacg
gccgtggatgactgcaaaacagtcaagttcacccttcagaacagtcaaaccttacattcc
aacattgctacattaggagagttatcatcatcagccttcgtcatcaatactgtcaaccca
aacagttcgtcaaatgctcctgtgaggaatcccagagcgtcgctctcaaatgaagcgttt
cgaggtcatcccgcggtggagatgtttcgtacctcctctcagctccacgcgacccctccc
gttctgagacattctccaagaactgtcagtgtctcgccccaagtgccttctccacagcct
gccaatagtacaccctcccctgcccagtcgaacagtgtagcaggtagagtgtctcacatc
tccacaacgagtagaagtgaacagaacagagctagagctaacaacaacaacggctcgctt
gaattcaccagttatgatgtcccgttgaacgacattgtctcggatttctctcgtgttcag
cgcagaagcccgacgtcggcgttctaccgcacaaaagggttgatccagacaaagtttggg
tccaagggtagcgacctggggcacttcacatggccccggggggtggcggtgtctcctgaa
aattacatcattgtggcagacagcagcaaccatagagttcaggtcttcacccccaatgga
cagctggttcgagtgttcggttcttatgggacaggagagggagagtttgactgtctagct
ggtgtcaccgtcaactcacagggttggattgtgacagcagacagatacaaccatcgtgtc
cagatattcgacagtaacgggagattcattcgtcaattcggccaggaaggcagccgcgat
ggacagctaagttacccatggggggtcgctacggacagaatggggttcatctacgtctgc
gacaaagacaaccacagagtacaggtcttccgattggacggtgcattcgtacgaaagttt
ggtcgcctcgggaacggtaacggtcagtttgaaaacccgcactacatcgctgtggcgagg
gataacaaagtcatcgtcagtgacagcagcaaccacaggatacaggtcttcgacaagtat
ggacgatttgtgctaaagtttgggagtgagggaagtgggaatggtcagtttaagtaccca
cgtggggtagctgtggaccaggaaggccatatcattgtgggagacagtggaaacaaccgg
ttacaggtcttcaggcaagatgggagctttctgtgtgcgtttgggacatggggtagtggg
gacggggaagtcaaaggactagagggcgttgcactcatgtccaggggtaatgttgtagtc
agtgatagggaaaatcacagaattcaggtattttag
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