Branchiostoma floridae (Florida lancelet): 118426139
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Entry
118426139 CDS
T01074
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
bfo01100
Metabolic pathways
Module
bfo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118426139
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bfo01003
]
118426139
Enzymes [BR:
bfo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118426139
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
118426139
Glycosyltransferases [BR:
bfo01003
]
Glycan extension
O-Glycan
118426139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Galactosyl_T
Glyco_transf_21
Motif
Other DBs
NCBI-GeneID:
118426139
NCBI-ProteinID:
XP_035691292
UniProt:
A0A9J7N343
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All DBs
Position
11:4173338..4182726
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AA seq
537 aa
AA seq
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MEMHLFDLRLSRKTKRTVSFISGVIIGFWIALSMMTHLRDKYERCPVSSTSEWTSGVPEQ
GWQAGYGPTSLENNQSHIYIGVITARKYLDSRAMAVYKTWGKQVPGKVEFFSTYDASGWS
PAGLPVVSSIPGIDDTYPPQKKSFLMLKYMHDFYIDKYDWFIRADDDVYIRVDKLDRFLR
SVNSSKLLYVGQPGFGKDDEFGKLGLREEGNYCMRGPGMIMSREVLRRVAPHISWCLRNL
YSSHEDVEIGRCIKTFAGVDCTWAYDTRDVFFNDYKNYHMGRIEELGISIINRAITLHPN
KRPEYQYKLHNKFQSLRLDDLNERVLALYRESNHISGLLQQPPTGLALTLGRQPSLTSYR
PRHVHDVLVWEFFTRRKMYGYSSKSGQPARGVSRLMREAIDSAMQKVVEKINSGSARSRR
TVKYNDLKYGYWRVSPLVGLQYVLQSFLTLREYHHGRRTLTVRKHVVVQQSFQSVQFTED
DSEQQSSFTGDNLNGERTSHDDTVHIIVPLTGRTASFERFMENYEKTESFLVDSRWT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcatttatttgatttacgtctgtcgagaaagaccaaaagaacagtatcattc
atatcaggggtcatcattggattttggatagcgctttcaatgatgacccatctacgagac
aaatatgagagatgtcctgtatcttctacatcagaatggacgtccggcgtgcctgaacaa
ggttggcaagcagggtacggtccaacaagtctcgaaaataatcagagtcacatctacatt
ggtgtcataacagcacgaaagtatctggactcgagagcaatggcagtctataaaacctgg
ggcaaacaagttcccgggaaagtcgaattcttctccacctacgacgcaagcggctggtct
ccagcgggtctgccggttgtctccagtatcccaggaatcgacgacacctacccgcctcag
aagaagtccttcctgatgctgaagtacatgcatgacttttacattgacaagtatgactgg
ttcatccgagcagatgatgatgtttacattcgcgtggacaagctagacagattcttacgc
tcggttaattcaagtaaacttctttacgtcggacagccgggatttggaaaggacgatgag
tttggtaaactgggattgcgcgaggaaggtaactactgtatgcgcggtcctgggatgatc
atgagccgggaggtcctgaggcgggtggccccacacatatcctggtgcttaagaaacctc
tactcctctcatgaagacgtggagataggtcgatgcatcaaaacgtttgcgggtgttgac
tgcacgtgggcgtatgacaccagggatgtatttttcaatgattacaaaaattatcatatg
ggtcgaatagaagaactggggatctctatcatcaaccgtgcaatcaccttgcatcccaac
aaaagaccggagtatcagtacaagctccataacaagtttcagtcgctgaggttggacgac
ttgaatgagcgtgtcctcgcactttatcgcgagagtaatcacatcagtggcctcctccaa
cagccacccactggtttagccttaacccttggaagacaaccttctttaaccagttacaga
ccaagacacgtccatgacgtcctggtgtgggaatttttcaccagaaggaaaatgtacggg
tattcatcaaagagtggccaaccagctagaggagtctcgaggctaatgagggaggctata
gactctgcaatgcagaaggttgtggaaaaaatcaactcgggatctgcaagatcacgccgg
actgtcaagtataacgacctgaagtacggctactggcgagtgagcccgctggtcggcctg
cagtacgtactccagtctttcctcaccctgcgagagtaccaccacggcagaaggacgctg
accgtcaggaagcatgttgttgtccagcagtccttccagtccgtccaattcactgaagac
gattcagagcaacaaagcagtttcactggtgacaatttgaacggagaaaggacgtctcac
gacgatactgttcacatcatagtgcctttgactggtagaacagcgtcatttgaaaggttt
atggagaactatgaaaagaccgagagttttctcgtggattcgcgctggacatag
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