Branchiostoma floridae (Florida lancelet): 118428625
Help
Entry
118428625 CDS
T01074
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118428625
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
118428625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3677
PIN_8
Motif
Other DBs
NCBI-GeneID:
118428625
NCBI-ProteinID:
XP_035694623
UniProt:
A0A9J7M5D8
LinkDB
All DBs
Position
13:complement(20106011..20156951)
Genome browser
AA seq
2135 aa
AA seq
DB search
MDRGKLGGPRKTKPKGPPPTGELIALGSKPTPLATDPKLPSQQRKLSATSSSLMPSSSSA
FAAKKPKLGVLTPLGRPAEAPKKPLVPARESSVAPILVPPSDLIDSILDAEAENNDDRVD
SLIVGAINTLKSNKAKPDQGVFLSLMFLAKTKPLIFLSEGVTESFCSLLKRDVSFNFKSK
GNPLVVVLTCNILMSAYQEEDNWPDNFVKVFVEDSLGERVWVDNPECKEFVANIQTAFNT
KLPPKSGLTSDLGGRPPSSTPEHCPSPTQFGDDDDKGSDVSEGLTTSERLTPDDQSITPR
YTFMQESIEGYILDTLKDQLTRRQAMDNLSRNLIRLMTVTCGYAEVRLMAVQRLEMWLQN
PKLTRPAQELLMSVCLNCVTQDPQDVEVVSALIRVRLKTKPLINHYNSCMRELLNAHPEN
LSLVLKHTIYNELSNSRNPNNMSLLAVLFQHSPEEAAKFLAVVFQELLTNREDYLRAVRA
LLREIIRALRGDLNFAAFCRSLMQERSESQFVEMEGHLKERLLLQLTDLICLGCLLSVTA
AVKEAASALSRGEKKDVETLRRFQLQSSVIQRDSVWWLHTIAPGMFKLNSTDYVQCIQKV
LFMESAESYYSKDNWPPEGERAYLLRLVSEVPVQEDTLMRLLVIGLSRDLPLSAVEALDL
ADQVVRRAASLHSPDFDVLPVERIQLVDAVLNLCAYHHPENIQLPQGYEPPTLAISNLYW
KGWMLLLTVSAFNPANIGHAAWEHYPQLKCFMEMVMTNDYDWPPGTLATEEKKAELINKE
LQMCELEKQEILEFESHLAAASTKVSITEANSLLISQLISMDPRSGTSQSMPWLAELVES
SEGSMEVLPVQCLCEFLLHDIGEEAAEQEDEELLEMEKSRMERLKQKSRKQDQLRRRLQT
LLYGPDSQPNQTHEVLQYFLRRLGSQQSAGRNLAAKALSMLLAPRTPPRQRSSTKDSSTS
DAPELDKEMAAAEEEDTVAMVTEEGAGSCPPELRSFHWLLVELPKLPHFDIVLATTVYAL
RQACQTETDPMAVSAYMLFLSQHAPPVVSDMADLALDMATVIVERPTIIAHLMPRGATSR
DETDIAFCALLAIYIQYFKMVLQPQGEPAWSESQDQIFLRWSTGEGATMHILVVHAMIIL
LTYGEPRGENEYSWLLEVWFPIEGQPPAAYLVDTSEEALLLPDWLKLRMIRSHVQRLVDA
ALLDLDPAQLVLFVQSFGIPMDSMSKLLICLDEAVTHNPLAMQQAVVDKAYMSQLVEVQH
MRGVLEERSSSFSVGDVEMVSPVEEERGLPRRPQPSYRPPSTEAGWMQEIVKLFPVDPGA
QVTSAMKKDIVKGIQLGLSKEISSVTRGDERRESLGDVLITTILHLCGGDYSIPFTSSLH
QNSHLSCPIFRLLMARENVLRKRKQSSGFPALVSRLVKYHSSRGTLTTVLKQYHRQLAPV
QKDINMLSALQAVLEAPYQHQQNLVRQAIAAIKHADPTQPLDFGLVHRVCALLCRFNSPL
LEEFLVACLTLGLRLPPGDAGKGEVMTQSHTQLLARMLMEQRGVSAAGGRVPSPVSGLLV
DWLETSDTEIVSTCADHQLHLLFSRDGGRSSTQPYLLALLTHQTNYSTLHRCIEFLLQGE
DKDRISSTAALDFLWACIHIPKVWQGRDTKVPQRCLDKEKILQLSPTQLCSLVDFILQEA
AQTCHASSGDPTTSDDPGSLRERLSDSIQARLPLLLSCCHGNKKEVSAEVLGYLQKKMAG
QDKDGAPHMHTHDSVSRGHLQGRMEATKGGHSQLDSFTHRLLSVLGNCEAGKVCEDRMYD
TNILCRKLATVHPALMLRQLPMIAALLRGRVHLNFDEFVHRHHFLFFTHVLGLLELLVPH
VFRKEHPLEDVLESYFDLLKEHYSSRRELGALVNKIIQFLHQFTSNDPQRAVALLQKHSA
TLHHVSKQYPDLSLLKSLLAGISLPSSSSDSVDETSSSSSKEGGLPETGRASPIPLVVPP
ASGTPWTAVQLAPHLKRIKKGQDHDDVLKVLHDLEQTSKRRVDVLEHFLADLKRLMSDSH
DDCRNIAHNLVMRHIKSKPSCAAEFLDAFLHCLDTNDHNIIKTTLRNLADYIVLCQEHSN
VLVRKAFSVGVQLKIDTSNIIADALNMLRLEGYND
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
atggacagaggaaagctaggcggtccgcggaagaccaagccgaaaggcccccctcccacg
ggagagctgatagcattgggcagtaagccgaccccgctggccactgaccccaaactgccg
tcacagcagcgcaaactttcagccacttcctcctccctgatgccctcatcatcatcagcg
ttcgcagccaagaaaccgaagctgggtgtgctgacaccgctgggcaggccggcagaggcg
ccgaagaaaccacttgtgccagccagggagtcatctgtagctcctatactggtgcctcca
tccgacctgatcgactccatcctggatgctgaagcagagaataacgatgaccgtgtggac
agcctgatcgtcggcgccatcaacacgctcaagtccaacaaggccaagcctgaccagggc
gtgtttctcagtctcatgttcctcgccaagacaaaacccctcatcttcctcagcgagggc
gtcacagagtctttctgcagcctgttgaagagagacgtttccttcaacttcaagtccaaa
gggaacccgctggtggtggtgctgacatgcaacatcctcatgtctgcttaccaggaggag
gacaactggccagacaactttgttaaggtgtttgtagaagactccctgggggagcgagtg
tgggtggataacccagagtgtaaggagtttgtggccaacatccagacagccttcaacacc
aagcttcctcccaagtctggcctgacttctgacctgggcggcaggccaccctcctccact
cctgaacactgccccagcccgacccagttcggtgatgatgatgacaaagggtcggacgtg
tcggaaggtctaaccacaagcgagcggctcactccggacgatcagagcatcactcccagg
tacaccttcatgcaggagagcatcgagggttacatcctggacactctgaaggaccagctg
acccggcgccaggccatggacaacctgtcgcgtaacctgatccgcctgatgaccgtgacc
tgcggctacgcggaggtcagactcatggcagtgcagcgcctcgagatgtggctccagaat
ccaaagctaaccagaccggctcaggagctgttgatgtccgtgtgtctgaactgcgtcacc
caggacccacaagacgtcgaggtcgtctcggcgctcatccgtgtccgcctcaagaccaaa
cccctcatcaaccactacaactcctgcatgagagagttactgaatgcacacccagagaac
ctgtccttggtactgaagcacaccatctacaacgagctctccaactccagaaaccccaac
aacatgtccctgttggccgtcctgttccagcacagtcccgaggaggctgcaaagttcctt
gctgtggtgttccaagagttgctgaccaatagggaggactaccttcgcgccgtgcgagca
ctgctgagggaaattatccgagcactgcggggagacctgaacttcgcagcgttctgccga
agcctcatgcaggaacgctccgaatcacagttcgtggagatggaaggtcatctcaaggag
cgactgctgttacagctgactgacctgatctgcctgggctgtctgctgagtgtgacagca
gctgtcaaggaggcagcttctgccctctcaaggggagagaagaaagatgtggaaaccctg
cgcaggttccagctgcagtcgtccgtcatacagagggactcggtctggtggctgcacacc
atcgcgcccggcatgttcaaactcaactccacagactacgtgcaatgcatccagaaggtg
ctgtttatggagtctgcggagtcttactacagcaaggacaactggccaccagagggggag
agagcgtacctgctgcgactggtgtcggaggttcccgtgcaggaagacacgctgatgcgg
ctgctagtgattggtctgtcccgcgacctcccgctaagcgctgtggaggcactagatctc
gccgaccaggtggtacgacgggccgcgtcactccactcaccagactttgatgtgctgcca
gtggagcggatacaacttgtggatgcagtgctgaacctgtgtgcctatcaccacccagag
aacatacagctgccacagggatatgaaccccccaccctggccatatccaacctgtactgg
aagggttggatgttactcctgactgtgtcagccttcaaccctgcaaatataggtcatgct
gcctgggaacactacccccagctgaagtgcttcatggagatggtcatgacaaatgactat
gactggccaccaggaactcttgccactgaagagaagaaggcagaactcatcaacaaggag
ctgcagatgtgtgagctggagaaacaggagattctggagttcgagagtcacctggccgct
gcctccaccaaggtgtccatcaccgaggccaacagcctcctcatctcacaactcatctcc
atggatcctaggtcaggcacatcccagtccatgccgtggctggctgagttggtagagagt
tcggaggggtccatggaggtgctgccggtccagtgcctgtgcgagttcctcctccacgac
atcggggaggaggctgcggagcaggaggatgaggaactgctggagatggagaagagcagg
atggagaggctcaaacagaagtcccgtaagcaagaccagcttcgccgccggctgcagacc
ctcctgtacgggccggactcccagcccaaccagacccatgaggtgctgcagtacttcctt
cggaggctgggatctcagcagagtgctggcaggaacctggctgctaaggctctgtccatg
ctcctggctcccagaacacccccgagacagcgctcatccaccaaagactcatccaccagc
gatgctccagagctggataaggagatggcagctgcagaggaagaggatacagttgccatg
gtgacggaggagggggcggggtcctgtcctccagaattgaggagttttcattggctgctg
gtggagctccccaaactgccacattttgatatcgtcctggcaacaacagtgtacgccctg
cgacaggcctgtcagacggagacggaccccatggctgtaagcgcctacatgctgttcctg
tcccagcatgcaccacctgtagtgagtgacatggcggacctggccctggacatggccaca
gtgatagtggaacggcccaccatcatcgcccacctgatgccgcgtggggcgacgtcacgg
gacgagaccgacatcgccttctgtgctctgctcgccatctacatccagtacttcaagatg
gtactgcagccacaaggggagccggcatggtcggagtctcaggaccagatcttcctgcgc
tggagcacgggggagggcgccaccatgcacatcctggtggtgcacgccatgatcatcctc
ctgacttacggggaacccagaggagagaatgagtacagctggctgctggaggtgtggttc
ccgatcgagggccagcccccggctgcctacctggtcgacacgtcagaggaggcactgctg
ctccctgattggctgaaactcaggatgatcaggtcacatgtccagagactggttgatgct
gccctgcttgaccttgaccctgcccagctggttctatttgtgcagtcctttgggatccct
atggacagtatgagcaaactgctgatttgccttgatgaggccgtgacacacaaccctctc
gccatgcagcaggccgtcgtggacaaagcctacatgagccagcttgtggaggtgcagcac
atgcggggtgtgttggaggagagaagttcaagcttttctgtgggagatgtggagatggtc
tcacctgtggaggaggagagggggttgccaagacgaccgcagccttcgtacaggccacca
tctacagaagctggctggatgcaggaaattgtaaagctgttcccagttgaccccggagcc
caggtcacttccgccatgaagaaggacattgtcaagggtattcagctgggcctgtctaaa
gagatctcctctgtgacacgaggagacgagcggagggagagtctcggagacgtcctcatc
actaccatcctccacctgtgtgggggagactactccatcccgtttacctccagtcttcat
cagaactcacacctgtcctgccccatcttcagactactcatggctcgagagaatgttctg
cggaagaggaagcagtcctctgggttccctgctctggtgtctcggctggtgaagtaccac
agtagcagaggtaccctcaccacggtactgaagcagtaccaccgacaactggcacccgtg
cagaaggacatcaatatgctgtcagccctacaggctgtcctagaggccccgtaccagcac
cagcagaatttggtccgacaggcgatcgctgccatcaagcacgcagaccccacccagccg
ctagacttcggcctggtgcacagagtgtgcgcgctgctgtgcaggtttaactccccactc
ctggaagagttcctggttgcctgtttgacccttggcctcaggctgcccccgggggatgct
gggaagggtgaggtcatgacccagagccacacccagctgctggccaggatgctgatggaa
cagaggggggtgtcagctgcagggggcagggttccctcccccgtgtcgggcctgctcgtt
gattggctggaaacctcggacaccgagatcgtgtccacctgcgcggaccaccagcttcac
ctgctgttctcgcgtgatggcggccgcagctccacacaaccctacctgcttgcgctcctg
acgcaccagactaactacagcacactgcacaggtgtatcgagttccttctacaaggggag
gataaggacagaatcagttctacggctgcactggacttcctgtgggcctgtatccacatt
ccgaaagtgtggcagggtcgggacaccaaagtaccacagagatgtctggataaagagaaa
atcctacagctcagccccacccagctgtgcagcctggtcgacttcatcctgcaggaggcc
gcccaaacctgccacgcgtcctcgggtgaccccacgacctcggacgaccccgggtcgctc
agggagcgcctctcggacagcatccaggcccggctgccgctgctgctcagctgttgccac
ggcaacaagaaggaggtgtcggcggaagttttggggtatctgcagaagaagatggcaggg
caagacaaagatggggcaccccacatgcacacccacgactccgtgtccagaggtcatcta
caaggaaggatggaggctaccaaagggggtcatagtcagctggatagctttacccaccgg
ctgttgtctgttctgggaaactgtgaggcagggaaggtgtgtgaggatcgtatgtacgac
accaacattctctgtaggaagctggccacggtgcatccagctctcatgctcagacaactc
cccatgatcgcagccctcctgcggggtcgggtgcacctgaactttgacgagttcgtccac
agacatcacttcctcttcttcacccacgtcttgggtcttctggagctgctggtgccacac
gtcttccgcaaggagcaccccctggaagacgtcttggaatcctacttcgaccttcttaag
gagcactactcaagccggagagagctcggtgctctggtgaacaagatcatccagttcctc
catcagttcacctcaaacgacccccagcgagcggtggccctcctacagaaacactcagca
acattacatcacgtctccaagcagtacccggacctgtccctactgaagtccctcctggcc
ggcatctctctcccctcctcttcatccgactctgtggatgaaacttcctcatcctcatct
aaggagggagggctgccggaaaccggaagagcctctcccattccattggttgttccacct
gcctccggcaccccctggacggctgtgcaactggctccgcacttgaagaggatcaagaaa
gggcaggatcatgatgatgtgctgaaggttcttcacgaccttgaacagacctccaagagg
agagtggatgtgttggaacactttctggctgacttaaagcgactgatgtcagacagtcac
gacgactgtagaaatatcgcccacaacctggtcatgagacacatcaagagcaaaccgagt
tgtgctgcagagttcctggatgccttcctccactgcctggacacaaacgaccacaacatc
atcaagaccaccctcaggaacctagcagactacatcgtgctgtgccaagaacattccaat
gtccttgtccggaaggcgttttctgtcggagttcagctgaagatagacacctccaacatc
atcgctgatgccctgaacatgctcagactagagggatacaatgattag
DBGET
integrated database retrieval system
