Bacteroides fragilis YCH46: BF3972
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Entry
BF3972 CDS
T00202
Name
(GenBank) putative outer membrane protein probably involved in nutrient binding
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfr02000
]
BF3972
Transporters [BR:
bfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BF3972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DUF4420
AtaL
Motif
Other DBs
NCBI-ProteinID:
BAD50714
UniProt:
Q64P68
LinkDB
All DBs
Position
4535840..4537459
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AA seq
539 aa
AA seq
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MKKINTALFCLFVLLFCSCDVLNKAPLDEIADDSFWSDETLVKYYVNDLYSEISVDGLQL
QENRSDNSVSAQRDKYRASWFKFNYDMVSASDPQDDDVWEDYYVKVRKCNRFFERIGTST
IEESEKSRLTGEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFILE
DLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKLGYELVDG
TTPEKYRSIWWTTNKDNKEIIFDVQYKSPDVYNNMMVCNMVTYINDKYGDRGWGGLGPTQ
ELIDAFEMADGTPATQYSQAPADQVFDINTCGIYEGREPRFYANIVFHGSQIFFNADKGA
VTVDRYLMDTPDKGDGSLTGYNVWKWIDYDNYNYPYAGAGSPDFSTNWIILRYAEIYLND
AEARLETGDVEGARKAVNMIRQRVGLPDLTESDPEKLRELIRKERRIEFAFEEQRFYDVR
RWKIGPETQTTLHGVRFVSPTEFKVTKTDIRTWNDRLYLTPVPHDEIVRSSVLKQNPGY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagataaatacagccctgttttgcttatttgtattgctcttctgttcgtgcgat
gtactgaacaaagctccactggacgaaatagcggacgactccttctggtcggacgaaaca
ctggtgaaatattacgtaaacgatctatatagcgaaatctccgtagacggactacaacta
caagaaaaccgcagcgacaattccgtctcggcacagcgtgataaataccgtgcaagctgg
tttaagttcaactatgacatggtcagtgcttccgatccgcaagatgacgacgtatgggaa
gattattacgtaaaagtacgtaaatgcaaccgtttcttcgaacgaatcggtacatcgacc
atcgaagaaagtgagaagtcaaggctaacaggagaagttcatttcttgcgcgccatgttc
tatttcgaaatggtaaagcgctatggcggagtgatcttgttggataaagtgctcaccatg
gaagataactgggaaatcccccgttcatctgagaaagaatgctatgacttcattctggaa
gacctcaaaaaagcaacagaaatgttgcctgcctcgtatggttcgagagaaaaaggccgg
gctaccaaaggtgccgcttatgcactgaaatcaagagtagagttgtatgacaaacgatat
gaagacgttatcaaaagttgtgccgaagtatataaattgggatatgaactggtagatgga
accaccccggagaaatatcgctctatctggtggactaccaataaagataacaaggaaatt
attttcgatgtacaatacaaaagcccggacgtatacaacaacatgatggtgtgtaacatg
gtgacgtatatcaacgataaatacggtgatcgcggatggggtggactcggtcctactcag
gaactgattgacgcatttgaaatggcagacggtactcccgctacacaatactctcaagct
cctgccgatcaggtattcgatataaacacttgcggtatttacgagggacgggaaccacga
ttctatgcaaacatcgtgttccacggttcgcaaattttctttaatgcagataaaggtgcc
gtgacagtagaccgctatctgatggatactcctgacaagggagacggttcccttaccgga
tataatgtctggaaatggattgattatgacaactataactatccgtacgcaggtgccggc
agcccggacttcagtactaactggatcatactccgttatgcagagatttatctgaatgat
gcagaagcgcgccttgaaacaggcgatgtggaaggcgcacggaaagcagtcaatatgatt
cgtcaacgagtgggattaccggacctcaccgaatcggatccggaaaaattacgtgaattg
atccgaaaagaacgccgtatcgaatttgccttcgaagaacaacgcttctacgacgtccgt
cgctggaagatcggccccgagacacagaccaccctgcacggagtacgttttgtttctcct
acagaatttaaagttaccaaaacggacattcgtacctggaatgaccggttatacctgaca
ccggtacctcatgacgagattgtccgctccagcgttctaaaacaaaatccgggatattaa
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