Bacteroides fragilis NCTC 9343: BF9343_3633
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Entry
BF9343_3633 CDS
T00239
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BF9343_3633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfs03400
]
BF9343_3633
Enzymes [BR:
bfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF9343_3633
DNA repair and recombination proteins [BR:
bfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BF9343_3633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecG_dom3_C
DEAD
Helicase_C
RecG_wedge
ResIII
tRNA_anti-codon
nSTAND3
SecA_DEAD
DAP3
Motif
Other DBs
NCBI-ProteinID:
CAH09414
UniProt:
Q5L918
LinkDB
All DBs
Position
complement(4402835..4404931)
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AA seq
698 aa
AA seq
DB search
MFDLTTRDIKYLSGVGPQKAAVLNKELEIYSLHDLLYYFPYKYVDRSRIYYIHEIDGNMP
YIQLKGKILGFETFGEGRQRRLLAHFSDGTGVVDLVWFQGIKYVTNKYKLHEEYIVFGKP
TVFNGRINVAHPDIDSPADLKLSSMGLQPYYNTTEKMKRSFLNSHAIEKMMATVIGQIQE
PLSETLSPKLIADHHLMSLTDALRNIHFPSNPELLRKAQYRLKFEELFYVQLNILRYAKD
RQRKYRGYVFETVGEIFNTFYSKNLPFELTGAQKRVLREIRQDVGCGKQMNRLLQGDVGS
GKTLVALMSMLMALDNGFQACMMAPTEILANQHYDTIRELLFGMDVRVELLTGSVKGKKR
EAILAGLLTGDVHILIGTHAVIEDTVNFASLGLAVIDEQHRFGVAQRARLWSKSVQPPHV
LVMTATPIPRTLAMTLYGDLDVSVIDELPPGRKPIATIHQFDNRRESLYRSVRKQIEEGR
QVYIVYPLIKESEKIDLKNLEEGYLHICEEFPDCKVCKVHGKMKPAEKDAQMQLFISGDA
QIMVATTVIEVGVNVPNASVMIIENAERFGLSQLHQLRGRVGRGADQSYCILVTTYKLTE
ETRKRLEIMVRTNDGFEIAEADLKLRGPGDLEGTQQSGIAFDLKIADIARDGQLLQYVRT
IAEEITDADLGGVLPENAILWQQLRALRKTNVNWAAIS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatttaactacacgagacataaagtacttatccggtgtcggcccgcagaaagct
gcggttttgaataaagagctggagatttattcattgcatgacctgctctattatttccct
tataaatatgtagaccggagtcgcatctattacattcatgaaatagatggaaatatgccg
tatatacaattgaaagggaagatattaggattcgaaacatttggtgaaggacgtcagagg
aggctgttggcgcatttttcggatggtacgggagtggttgacctagtatggtttcaaggt
ataaagtatgttaccaataaatataaacttcatgaagaatacattgttttcggtaagcca
acggtgtttaacggaagaatcaatgtagcccatcccgatatagatagtcccgccgatctg
aaattgtcgtcaatgggacttcagccctattataatacgacggagaagatgaagcgcagc
tttcttaactcccatgcgattgaaaaaatgatggcaaccgttatcggacagattcaggag
cctttgtccgaaacactttcacctaaactgattgccgatcatcatttgatgtctttgacg
gatgcattgcggaatattcattttccttctaatccggaattgttgcgaaaagcacaatat
cgtcttaagtttgaagaactcttctacgtacaactcaatattctgcggtatgccaaagac
aggcaacgcaaatatcgcggctatgtttttgaaacggtaggagagatttttaatacgttc
tattcaaagaatctccctttcgaattgacaggcgctcaaaagagagttttaagggagatc
agacaagacgtagggtgtggaaagcaaatgaaccggctattgcagggagatgttggaagt
ggaaaaacattggtggcattgatgagcatgttgatggcactggataatggatttcaggct
tgcatgatggcgcctaccgaaattttggctaaccaacattacgataccatcagagaactg
ttgtttgggatggatgtaagggtggagttgctgacaggctcggtaaaaggcaagaaacgg
gaagctattcttgcgggactcctgaccggagatgtacacatcttgataggtacccatgcc
gtgattgaagatactgtaaattttgcttcgctgggattggctgtcatcgacgaacaacac
cgctttggagtggcacaacgtgcccgcctgtggagtaaaagtgttcagccacctcatgtg
ttggttatgactgctactccgatcccacgtacattggctatgacactttatggtgatctg
gatgtttcggttatagacgaattacctcccggccgtaagccgattgctacgattcaccag
tttgataaccgtagagaaagtttgtatcgttcggtacggaaacagatagaggaaggccgc
caggtttatattgtttatccactgattaaagagagtgaaaagattgatctaaagaatctt
gaagaaggatatctgcatatctgtgaagagttccccgactgtaaggtctgcaaagtgcat
ggcaagatgaagcctgctgagaaggatgcacagatgcaactttttatttcgggtgatgcg
cagatcatggtagccaccacagtaattgaagtcggtgtgaatgtgcccaatgcttcggtg
atgattatcgagaatgccgaacgtttcggactatcccagttacatcagctacgtgggcga
gtggggcgtggagctgatcagtcttattgtattttagttactacgtataaacttaccgaa
gagacccggaagcggcttgaaattatggtgcgcaccaatgacggatttgaaatagccgag
gcagatcttaaactacgcggtcccggggacttggagggtacgcaacaaagtggcattgct
ttcgacctgaagatcgcggacatagcccgtgacggacagcttttgcaatatgtgcgcact
attgctgaagaaataacagatgccgatcttggcggagtattaccggagaatgcgattttg
tggcaacagttgagagcattgcgcaagacgaatgttaactgggctgctattagttga
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