Botrytis cinerea (Gray mold): BCIN_01g09610
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Entry
BCIN_01g09610 CDS
T01072
Symbol
Bcsmb1
Name
(RefSeq) Bcsmb1
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
bfu
Botrytis cinerea (Gray mold)
Pathway
bfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BCIN_01g09610 (Bcsmb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfu03019
]
BCIN_01g09610 (Bcsmb1)
03041 Spliceosome [BR:
bfu03041
]
BCIN_01g09610 (Bcsmb1)
03032 DNA replication proteins [BR:
bfu03032
]
BCIN_01g09610 (Bcsmb1)
Messenger RNA biogenesis [BR:
bfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
BCIN_01g09610 (Bcsmb1)
Spliceosome [BR:
bfu03041
]
Complex A
U1 snRNP components
Sm proteins
BCIN_01g09610 (Bcsmb1)
U2 snRNP components
BCIN_01g09610 (Bcsmb1)
Complex B
U1 snRNP components
BCIN_01g09610 (Bcsmb1)
U4/U6.U5 tri-snRNP components
BCIN_01g09610 (Bcsmb1)
Complex C
U2 snRNP components
BCIN_01g09610 (Bcsmb1)
DNA replication proteins [BR:
bfu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
BCIN_01g09610 (Bcsmb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5434154
NCBI-ProteinID:
XP_024546616
LinkDB
All DBs
Position
1:complement(join(3339749..3340210,3340261..3340332,3340412..3340420,3340498..3340521))
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AA seq
188 aa
AA seq
DB search
MANKQGKMAGLINYRMRVTMNDGRQMVGQMLAFDKHMNLVLADTEEFRRVKRKAPKTTAA
PGASSAAPPLVETEEKRTLGLTIIRGTHVISLSVESPPPADPSSRLGASVPGGAVPSAAM
AAGTGIARPAAGRGGLAGPAVGIGGFPGMPAPPPFGRGAPPPGFGGGFPPPGFPGPPGPP
GGFAPPRR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagcagggaaagatggccggtctcatcaactaccggatgagagtgactatg
aatgatggacgtcaaatggtcggacagatgttagcatttgacaagcacatgaacctcgtt
ctcgccgataccgaagaattcagacgcgtcaagcgcaaggcaccaaaaaccacagccgcc
cctggagctagttctgctgcaccacctcttgttgaaaccgaagaaaagcgaacattaggt
cttactattattcggggcacacacgtcatatctctttctgtcgaatcgccaccaccagca
gacccaagttctcgcttaggtgccagcgtcccaggtggtgctgtaccatcagctgctatg
gccgctggaactggaatcgcgaggccagctgctggaagagggggcctggctggtcctgct
gttggaattggtggtttcccgggtatgccagctcctccgccatttggaagaggtgcacca
cctccaggatttggtggtggatttcctcctccaggtttcccaggtccacctggtccacca
ggaggcttcgctccacctcgcaggtaa
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