Botrytis cinerea (Gray mold): BCIN_12g01820
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Entry
BCIN_12g01820 CDS
T01072
Symbol
Bchca4
Name
(RefSeq) Bchca4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
bfu
Botrytis cinerea (Gray mold)
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfu03009
]
BCIN_12g01820 (Bchca4)
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BCIN_12g01820 (Bchca4)
Ribosome biogenesis [BR:
bfu03009
]
Eukaryotic type
90S particles
Helicases
BCIN_12g01820 (Bchca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
5430775
NCBI-ProteinID:
XP_024552078
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All DBs
Position
12:join(633323..633448,633501..635774)
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AA seq
799 aa
AA seq
DB search
MAPPASGRKAKNVSKGKNDAKTLKRKRDVEDHEKLQKSVDELDAKAEIKNFSELPLSEPT
SSGLEASHFKTLTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPVLENLYRQKWTELD
GLGALIISPTRELAIQIFEVLRKIGRYHTFSAGLIIGGRSLQEERERLGRMNILVCTPGR
MLQHMDQTAAFDVDNLQMLVLDEADRILDMGFQTSVDAILEHLPKQRQTMLFSATQTKKV
SDLARLSLKEPEYVAVHEAASSATPTTLQQHYCVVPLPEKLNTLFGFIRANLKAKIIVFM
SSGKQVRFVYESLRHLQPGIPLLHLHGRQKQTARLDITSKFSSSKNSCIFATDVVARGLD
FPAVDWVIQLDCPEDADTYIHRVGRTARYGKVGRAVMFLDPSEEEGMLKRLEHKKVPIQK
INIRPNKTQDIKNQLQNMCFQDPELKYLGQKAFVSYAKSVFLQKDKEIFNINEVDLEGFA
SSMGLPGAPKIKFQKGNDAKNVKNAPRGAIESSDDDSETEKKPKKKEEVRTKYDRMFERR
NQDVLSGHYSKMIADDTPVKDADGTADADEDNDFLSVKRVIPVDNNDSSDDDDDDDVAAT
GPLGKVIEGISKDPIVIDSKRKEKLLKSKKKLLKLKDRGTKLVFDEEGNPHQVYELEDEE
DFRARGPAEEQRAKFLEEEAERVREADLLDKQTAKDKKREKREKRKAREAALEDDDEAPE
LVGSGDDEDPMALLRSLPLPEDEEDEDSTARPAKRPKKWFEDDSDDERKVAKRKGRVIEA
ADEPETLEDLEALAAGLLN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaccagcttccgggcgcaaggccaagaatgttagcaagggtaaaaatgatgcg
aaaactttgaaaaggaaaagagatgtagaagatcatgaaaagcttcagaaatcagtcgac
gagcttgatgcgaaagcagagatcaaaaacttctctgaacttcccctatctgaaccaaca
tcatctggactcgaagcatcccattttaaaactttgacggacgttcaatcgaaagctgta
ccacttgcgctcaagggaaaggatattttgggcgctgcgaaaaccggtagtggaaagact
cttgcattcttagtaccggtattggagaatctttacagacagaaatggaccgaattggat
ggcctcggtgctcttatcatatctccaactcgtgaattggcaatacaaatattcgaggtt
ttgcgaaaaattggacgataccacactttctcggcaggattgatcattggaggtcgaagt
ctgcaagaggagagggaacgtttggggaggatgaacatacttgtgtgtacacctgggcgc
atgttacaacatatggaccaaacggctgcattcgatgttgataacctacaaatgttagtc
ctggatgaggcggatcgaattttggacatgggatttcaaacatccgtcgacgctatactg
gaacatttaccgaaacaaagacagacgatgctgttcagtgccacacaaacgaagaaagta
tcggatctagcaagattgagtttgaaggaacccgaatatgtcgcagtacatgaagctgca
tcctcagctacccccacaacattacaacaacattactgtgtggtacctctgcccgaaaag
ctcaacacgctgtttggcttcattagggctaatctaaaggctaaaataatagtatttatg
tcttcaggcaagcaagtgcggtttgtctacgaaagtctaaggcatttacaacctggtatt
ccattgcttcatctgcacggtaggcaaaagcaaaccgcgaggcttgatataacttcaaag
ttttcctcttcgaaaaattcttgtatatttgctacagatgttgttgcaagaggacttgac
tttcctgcagttgattgggttattcaattagattgccccgaggatgctgatacctatatt
cacagagttggtcgaactgcacgttatgggaaagtaggccgggcagtcatgtttctggat
ccatctgaggaagaaggcatgctgaaaagattggaacataagaaagtaccgatacaaaag
attaatatccgacccaataaaacgcaagacatcaagaaccaattacaaaatatgtgtttc
caagaccctgagctgaaatacttaggtcagaaagcatttgtcagttacgccaaatctgtc
ttcttacaaaaggacaaggagatattcaatatcaatgaggttgatttggagggctttgct
tcgagtatgggtcttcccggtgcgcccaagattaaattccagaaaggaaacgatgcaaag
aatgtcaaaaatgctccaagaggtgctattgagtctagcgacgacgacagtgaaaccgaa
aagaaacctaagaagaaagaagaagtccgaacgaaatacgatagaatgtttgagcgccgt
aaccaggatgttttatctggccattactccaagatgatcgcagatgataccccagtgaag
gatgcagatggtactgcggacgctgatgaggacaatgatttcttgtcagtcaagagagta
atacctgtggacaacaacgacagttccgacgatgacgatgatgatgacgttgctgcaacc
gggccactaggaaaggttatcgagggtattagcaaggatcctattgtgatagactcgaaa
cgaaaagagaaacttctgaaatccaagaagaagcttcttaagctcaaagatagaggaaca
aaattggtattcgatgaagaaggcaatcctcatcaagtgtacgaattggaagacgaagaa
gatttccgcgccagaggtccagccgaagagcaacgagctaaattcttggaagaagaagct
gaaagagttcgcgaagcagatcttcttgataagcaaactgcaaaggataagaaacgagaa
aagcgtgagaaacgtaaagcaagagaagcagcattggaggacgatgacgaggcacctgaa
ttggttggttctggagatgacgaagatccaatggctcttctcagatctttgcctctaccg
gaagacgaggaagatgaagatagtacggcgagacctgcaaagagacctaagaaatggttt
gaggatgattcagatgacgagagaaaggttgctaagagaaagggacgtgttattgaagct
gcggatgaacctgagacattggaagacctggaggctttggctgctggacttcttaattaa
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