Botrytis cinerea (Gray mold): BCIN_13g04400
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Entry
BCIN_13g04400 CDS
T01072
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bfu
Botrytis cinerea (Gray mold)
Pathway
bfu03022
Basal transcription factors
bfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BCIN_13g04400
09124 Replication and repair
03420 Nucleotide excision repair
BCIN_13g04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfu03021
]
BCIN_13g04400
03400 DNA repair and recombination proteins [BR:
bfu03400
]
BCIN_13g04400
Enzymes [BR:
bfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BCIN_13g04400
Transcription machinery [BR:
bfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BCIN_13g04400
DNA repair and recombination proteins [BR:
bfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BCIN_13g04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
SNF2-rel_dom
UvrD_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
5429170
NCBI-ProteinID:
XP_024552645
LinkDB
All DBs
Position
13:complement(join(1586856..1588229,1588280..1588377,1588434..1588764,1588809..1588925,1588980..1589233,1589285..1589416,1589473..1589492,1589564..1589573,1589628..1589668,1589724..1589740))
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AA seq
797 aa
AA seq
DB search
MKFNIDDLPVLFPYPRIYPEQYAYMCDLKRTLDAGGHCVLEMPSGTGKTISLLSLIVAYQ
QYYPEHRKLIYCSRTMSEIEKALAELKALMKYRAEQLGHQEDFRGLGLTSRKNLCLHPSV
KREKSGAVVDARCRSLTAGFVKEKKERGEDVPVCIYHDNLDLLEPHNLIPNGVWTLDGIM
RYGEEHKQCPYFTSRRMMSFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDN
VCIESLSTDITDDSLRRATRGAMNLESRISDLRDSDSEKLKDEYAKLVEGLRGADEARAE
DAFMSNPALPDDLLKEAVPGNIRRAEHFVVFLKRFIEYLKTRMKVRQVISETPASFLAHL
KEYTYIEKKPLRFCAERLTSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPY
ESDTAEVPNPVLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLNFECVVQESY
PMTLARRSFLPMIVTRGSDQVAISSGFQVRNEPAVVRNYGNLLTEMSKLTPDGMVVFFPS
YLYMESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVAR
GKVSEGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAA
QCLGRVLRGKDDYGIMVLADRRFLKKRTQLPKWINQAILDSEVNLSTDMAVGSAKKFLRN
MAQPFKAKDQEGISTWSLQDLEKFKEKQYEETLQALRGGGKGDPMDGIKNGNEQTVKEDE
YGMDDDEMEASLMQLDA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaatattgatgatttgccagtgctctttccatatcccaggatatatccagaa
caatatgcctacatgtgcgatctgaaaagaacgcttgatgccggcggccattgtgttttg
gagatgccttcgggtactggaaagaccatctcactgttgtctttgatcgttgcatatcaa
caatactacccagagcatcggaaactcatttactgctcacgtactatgtccgaaattgaa
aaagctttggcagaattgaaagctcttatgaaatatagggccgaacaactcgggcaccag
gaagacttccgtggattaggattgactagtcgtaaaaatttatgtctccatccctctgtg
aagcgggaaaagagtggtgctgttgtggatgctcgctgtcgaagtttgactgctggattt
gtgaaagagaagaaggagagaggcgaagatgtaccggtgtgcatttatcatgataacctg
gacctcctcgaaccacataatcttataccaaatggagtatggacattggatgggatcatg
agatatggcgaggaacacaaacaatgcccatactttacctccaggcgaatgatgtctttc
tgcaacgtgatcatttactcataccattacttactcgaccctaaaatcgccgagagagtt
tctaaagagctgtcgaaggattgcatagttgtatttgacgaagcacataatattgataac
gtgtgcatcgaatccttaagtactgacatcacggatgactcgcttcgaagggccactcgt
ggagctatgaatctcgaaagcaggatttcggatttgagggatagcgactcagaaaaactc
aaggatgaatacgctaaattggtcgagggactgcgcggtgccgatgaagctcgagcagag
gatgccttcatgtcaaatcctgctctaccggacgacctcctcaaagaagctgtgcctgga
aacattcggagggctgaacattttgtcgttttcctgaaacggttcatcgaataccttaag
acacgaatgaaagtccggcaagttatctcggagacaccggcatcttttttggctcatcta
aaggagtacacatacatcgagaagaagcctctgagattttgcgcagaacgtctaacatcc
cttgtgcggacactagaactcaccaatattgaggactatcaaccacttcaggaagtagca
acttttgccactctcgtagcgacatatgagaagggatttcttcttatacttgagccttat
gaatctgatactgccgaagttcctaaccctgttcttcacttcacctgtcttgatgctgca
atagcaatcaagcccgtctttgagcgcttcagctctgtaattatcacgtctggtaccatt
tctccactcgaaatgtatcctaaaatgctcaatttcgagtgtgttgtccaggaatcttat
cccatgaccctcgctcgacgctcttttttgcctatgattgtcacaagaggatcagaccag
gttgcaatttcttcgggatttcaagttcgaaatgagcctgctgttgtccgtaattacggc
aatttactaacagagatgtccaagctcactccggatggcatggtcgttttctttccatcc
tacctctacatggaatcaattattagtatgtggcaaggaatgggtattttagatgaggtt
tggaaatacaagcttattcttgtggaaactcctgatgcacaagaaacatctctagcatta
gagacctatcgcacggcgtgttgcaacggacggggagctatccttctttgtgtcgctcgt
ggaaaagttagtgagggtatcgatttcgaccatcaatacggacgcactgtgctatgtatc
ggagtaccattccaatacaccgaatctcgaattctgaaagcgcgactagagttcctccgt
gaaacataccggatcagagagaatgatttcctatctttcgatgccatgagacatgcagcc
caatgtttgggacgtgtactcagagggaaagatgattatggaatcatggtgttggccgat
cgtcgattcttgaagaagcgaactcaattgccaaaatggatcaaccaggcaattctcgac
agtgaggtcaatttgagtactgacatggcggtaggaagtgcgaagaaattcttacggaat
atggcacagccattcaaggctaaagaccaggaggggattagtacgtggagcttgcaggac
ctagagaaatttaaggagaagcagtatgaagagacgcttcaagcattgagaggtggtgga
aagggtgacccaatggatggcatcaagaatggcaatgagcaaacagttaaagaggatgag
tatggtatggatgatgatgaaatggaggcgtcgttgatgcagctagatgcatag
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integrated database retrieval system
