Blastomonas fulva: B5J99_06865
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Entry
B5J99_06865 CDS
T05612
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bfw
Blastomonas fulva
Pathway
bfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5J99_06865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfw03019
]
B5J99_06865
Enzymes [BR:
bfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5J99_06865
Messenger RNA biogenesis [BR:
bfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5J99_06865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
AAA_22
UvrD-helicase
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ASR51223
UniProt:
A0A222WZL0
LinkDB
All DBs
Position
complement(1460406..1461800)
Genome browser
AA seq
464 aa
AA seq
DB search
MSYFHELGLADPILRALDSKGYDTPTPIQRDAIPALLQGRDLLGIAQTGTGKTAAFSLPS
LHHLAKESKGRTHKGVRMLVLSPTRELAAQIAENIREYARFLNLSVNCIFGGVPIFQQKK
KLVPGTDVLVATPGRLLDLIEQRAVTLENVEIFVLDEADQMMDLGFIVPLKRIASMLPKN
RQSLFFSATMPKAIAELGARFLNNPVRVEVAPQATTAERVEQYVTFVSQSEKQALLTLKL
QEIRPERTLVFTRTKHGADKVVRALAGAGIRSAAIHGNKSQGQRTAALKAFKDNEIKVLI
ATDIAARGIDITGVSHVFNYDLPNVAEQYVHRIGRTARNGADGIAIAFVSGDERGLLKDI
ERLTKVKPVPMPLPKGFSEAAAQLPPPVKAPVNSGGGGRGGERGSGDRSGPGGRNYGPKR
DGARRRSGGGGRPGGGGGRSGGGGGGGARVGGVGAHKDSVKRIG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttccatgaacttggccttgccgatccgatcctgcgcgcgctcgattccaag
ggttacgataccccgacgccgatccagcgcgatgccatccccgcattgttgcagggccgc
gacctgctcggtatcgcgcagaccggcaccggcaagaccgcagccttctcgctgccctcg
ctgcatcacctcgccaaggaatccaagggccgcacgcacaagggcgtgcgcatgctggtc
ctctcgccgacccgcgaactggccgcgcagatcgccgagaacatccgcgaatatgcgcgc
ttcctgaacctttcggtcaactgcatcttcggcggcgtgccgatcttccagcagaagaag
aagctggttcccggcaccgacgttctcgtcgcaacgccgggccgcctgctcgacctgatc
gagcagcgcgcggtgacgctcgagaatgtcgagatcttcgtgctcgacgaagccgaccag
atgatggacctcggcttcatcgtgccgctgaagcgcatcgcatcgatgctgcccaagaac
cgccagagcctgttcttctccgcgaccatgcccaaggcgattgccgagctgggtgcgcgg
ttcctgaacaacccggtccgcgtcgaagtcgccccgcaggcgacgacggccgagcgcgtc
gaacagtatgtcaccttcgtcagccagagcgagaagcaggcgcttctcacgctcaagctg
caggaaatccgccccgaacgcacgctcgtcttcacccgcaccaagcatggcgcggacaag
gtggtgcgcgcgctggcaggtgcgggcatccgttccgccgcgatccatggcaacaagagc
cagggccagcggactgccgcattgaaggcgttcaaggacaacgaaatcaaggtcctgatc
gcgaccgatatcgcggcacgcggcatcgacatcaccggtgtcagccatgtgttcaactat
gatctgcccaacgtggccgagcagtacgtccaccgtatcggtcgtaccgcgcgcaacggc
gccgacggcatcgcgattgctttcgtcagcggtgacgagcgcggcctgctcaaggacatc
gaacgcctcaccaaggtgaagccggtgccgatgccgctgcccaagggcttcagcgaagcc
gcagcgcagcttccgcccccggtcaaggcgcccgtcaattcgggcggcggcggtcgcggt
ggcgaacgtggcagcggcgatcgctcgggccccggtggccgcaactacggccccaagcgt
gacggcgcacgtcgtcgctcgggcggtggtggtcgtcccggtggcggcggtggccgctcg
ggtggcggtggcggcggcggtgcccgcgtcggcggcgtcggcgcgcacaaggacagcgtc
aagcggatcggctga
DBGET
integrated database retrieval system
