Bufo gargarizans (Asiatic toad): 122928456
Help
Entry
122928456 CDS
T07965
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgar03000
]
122928456 (SOX5)
Transcription factors [BR:
bgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122928456 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122928456
NCBI-ProteinID:
XP_044137238
EnsemblRapid:
ENSBGGG00000006462
LinkDB
All DBs
Position
2:complement(513672107..513868032)
Genome browser
AA seq
816 aa
AA seq
DB search
MGETMLGTVDGGIDGHQVLETLQVPFKQSEVASVTKGYCAGFSMLTEPDVPPEFERMSSK
RPASPYGEADGEVAMVTSRQKMEDEESGGLAAFHLPLHASFPNKTQSEEFQAVSLLTQDT
CDHRSPTYQHNSMDIDGNKAVSSFAPQNSATSPLKADEGGRQSGESLSNTALGTPERRKG
SLADVVDTLKQRKMEELIKSEPEETPSIEKLLSKDWKDKLLAMGSGNLGDIKGTPESLAE
KERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQ
QQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAAAQQGFLIPPGFSYKAGCSDPYP
LQLIPTTMAAAAAAAATPGIGPLQLQQFYAAQLAAMQVSPGNKMPGMPQGNLAAMSPTSM
NTEKSTSSPPPKTKDDVAQPLNLSARPKTSDRKSPASPASPHIPTSRISSGISSHKPSVS
YTLASPPVRVNSIDILSSITSTGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVSVNS
LGLNNCRTEKDKSSLECLSQQLSVRQSDDGKLGHTMMDFNLSGDSDGSAGVSESRIYRES
RGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYY
EEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRSRRQEMRQYFNVGQQA
QIPITTTSVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMQVIQSTYSLKGDEPHIKVEA
PNVDINGEIYDEYDEEDDPDVDYGSDSEHHRTEQTN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggagagacaatgcttgggacagtggacggcggcatagacggtcaccaggtgctggag
acattacaggttcccttcaagcaatcagaggtggcatcggtgacaaagggatattgtgct
gggttcagcatgctcactgagccagacgttcctccggagtttgaaaggatgtcttccaag
cgaccagcctctccgtatggggaagcagatggagaggtagccatggtgacaagccggcag
aaaatggaagacgaggagagtggaggcctcgcagcctttcaccttcccctgcacgccagt
ttccccaataagactcagtcggaggaatttcaggcagtttctctgttgacgcaagacacc
tgcgaccacaggagtcccacgtaccaacacaactcaatggatatagacggcaataaggcg
gtctcttcatttgcccctcaaaactcagctacctcacccctgaaggcagatgaaggtggg
agacagagcggcgaatccttgtctaacaccgcattggggacccccgaaaggcgaaaaggt
agcttagccgacgtggtggacacactgaagcaacggaaaatggaggagctgatcaaaagc
gaaccagaagaaacacccagcattgagaagctcctgtctaaggactggaaggacaagctc
ctcgctatgggatcagggaacctgggcgacataaaagggactccagaaagcctagcggag
aaggagcgccagctcatgggaatgataaaccagctcaccagtctgcgagaacagctgctg
gcagcgcatgacgagcagaaaaaactcgccgcttcacagatcgagaaacagcggcagcag
atggaactggccaaacagcagcaagaacagattgcaagacaacagcagcagctcctgcag
cagcagcataaaatcaacctgctccaacagcaaatacaggtccagggtcagctgcccccc
ctaatgatcccagtgttccctcccgaccagaggacgttagcagctgctgcagccgctcag
caaggctttctcatccctcctggatttagctataaggccggatgcagtgacccttaccct
ttacagctgattccaaccaccatggcagcagctgccgccgccgccgccacgccgggtata
ggacctcttcagctacagcaattttatgccgcacagctcgctgccatgcaggtgtctccg
gggaacaagatgcctggtatgccgcaggggaacctcgctgctatgtctccaacaagtatg
aacacagagaagagtacgagcagcccgccgcccaaaaccaaggatgatgttgcacagccg
ctgaacctttctgccaggcccaagacatcagacagaaaatcacccgcatcacccgcctca
ccgcacatcccaacgtcgaggataagcagcgggattagttcacacaaaccgtccgtctcc
tacacgctcgccagcccgcccgtcagagttaattctatagatatcctctcctccatcaca
tcaacgggttacttaaacgaccacgacgccgtgaccaaggcaatccaagaagcgcggcag
atgaaggagcagctgaggcgggagcagcaggtcctggatgggaaggtgtctgtcaacagc
cttggcctgaacaactgccggacagagaaggataaatcctcgttagaatgtctgtcgcag
cagctctcggtgcggcagagtgatgatgggaagctcggtcataccatgatggacttcaac
ttaagtggagactctgacggaagtgctggagtgtcagaatctagaatatatcgggagtcc
cgaggacgtggaagcagcgagccgcatattaaacggccaatgaacgccttcatggtctgg
gcaaaagacgagcgcagaaaaatccttcaggctttccccgatatgcataactcaaacatc
agcaagatattaggatctcgctggaaagccatgacaaatctagagaagcagccatactat
gaggagcaggcccgactcagcaagcagcacctggagaagtatccggactacaagtataag
ccacggccgaaacgcacatgtctcgtagatggcaaaaaactgaggatcggtgaatataaa
gcgatcatgaggagcagacgacaggagatgagacagtattttaatgttggccaacaagca
cagatcccaatcaccacgacgagtgttgtttacccaggagccatagctatggcaggaatg
ccttcaccccacttaccctctgaacattcgagtgtctcaagtagccctgaaccaggcatg
caagtcatccaaagcacttacagcttaaaaggagatgaacctcacatcaaggtggaagct
ccaaacgtggacatcaatggtgaaatatatgatgagtacgatgaggaggacgacccagac
gtggattatggcagtgacagtgaacatcacagaacggagcagaccaactga
DBGET
integrated database retrieval system
