Bufo gargarizans (Asiatic toad): 122933153
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Entry
122933153 CDS
T07965
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03013
Nucleocytoplasmic transport
bgar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122933153 (UPF3A)
03015 mRNA surveillance pathway
122933153 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgar03019
]
122933153 (UPF3A)
Messenger RNA biogenesis [BR:
bgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122933153 (UPF3A)
mRNA cycle factors
P-body specific factors
122933153 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
122933153
NCBI-ProteinID:
XP_044143906
LinkDB
All DBs
Position
3:207882476..207901619
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AA seq
451 aa
AA seq
DB search
MRSERETPPAVLRGNGRDVERSGTATTVKERKATLSKVVIRRLPPSISKEQLEEQLHPLP
AYDYFEFCSADPSLYPHLFSRAYINFRNPDDIILFRDRFDGFIFIDSKGQEYPAVVEFAP
FQKISKKKLKKRDTKAGSIADDLEYKKFLENYCAEEEKICANPETLLGEIEAKTKELIAR
RTTPLLEFIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEERRKRKEADKQK
KLCEKEIRIKLLKKSEKGDEIISEKQKEKVDEIDHEDSKWEKSSGNNKARTFENFVKELK
ETTQNDSDKEQREIEKRYRDKDQDRQRYHRMDDGRKARNNYEFDKFLRRNEDDQKWGKGF
SQDRAKKGSHNNSYAADAVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGARSRITTG
FTNKYVEDPSYMKNDADNISGRSSEKSEDAG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgagcgggagacgccgccggccgtgctgaggggaaacggtcgagatgtggaa
cggagcgggacggcgaccaccgtgaaagaacggaaggcgactctgagcaaggtggtaata
cgtcgtcttccgccaagcataagtaaagagcaactggaggagcaactgcatccgttacca
gcttatgattactttgaattctgctctgctgatcccagcctctacccgcatctcttctca
agagcctacattaactttagaaacccagacgacatcattctcttcagagaccgatttgat
ggatttatcttcattgacagcaaaggccaggagtatccagctgttgttgaattcgcaccc
tttcagaaaatttctaaaaagaaactgaagaaaagggacacaaaagctggaagcatagca
gatgatttggaatacaagaaatttttggagaactactgtgcagaggaggaaaaaatatgt
gcaaatccagagaccctcttgggagaaattgaagcaaaaactaaggagctcattgctaga
agaacaactccacttcttgaattcatcaaaaatcggaagttagagaaacagagaatacgg
gaagaaaagagggaagagaggaggaggcgggagctggaaaaaaagcgattgagagaggaa
gaaaaaagaaaaaggcgagaagaagaaaggcgtaaacggaaagaagcagacaagcaaaag
aagttgtgtgaaaaagaaatacggattaagctcctaaaaaaatctgaaaagggagatgaa
atcatcagtgagaaacaaaaggagaaagtggatgaaattgaccatgaagactctaaatgg
gaaaaatcatctgggaataataaagcgagaacatttgaaaactttgtgaaggaacttaag
gaaacgacacagaatgatagtgacaaggagcaaagagaaattgaaaagagatacagagat
aaagatcaagatcgacaaaggtatcatcgaatggatgatggcagaaaagcaagaaacaac
tatgagtttgacaagtttcttagaaggaatgaagatgaccagaaatggggaaaaggattc
agccaagatcgggccaagaaagggagccacaacaacagctatgcagcggatgctgtagac
aaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataagaaat
aaggatcgcccggccatgcagctgtaccagccaggagctcgcagtcgcataactacagga
tttacaaataaatatgtggaggatccgtcttacatgaagaatgatgcagacaacatatct
ggaagaagctcagagaagagtgaagatgctggataa
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