Paraburkholderia atlantica CCGE1002: BC1002_3661
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Entry
BC1002_3661 CDS
T01217
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_3661
Transporters [BR:
bge02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1002_3661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
CopB
Motif
Other DBs
NCBI-ProteinID:
ADG17686
UniProt:
D5WGU1
LinkDB
All DBs
Position
2:complement(512635..514158)
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AA seq
507 aa
AA seq
DB search
MKFAPLKGLRAGARPSCDPSARTAAIHRTLLPSMRRVALCTVFASASLTGHAALAEANPD
GNPEAPEADLSIETTQTKESTGFWDRQQMLGDMGGLRPWLGKYGMTFTLTETSEVLANLR
GGLARGADYDGLTTATLQMDTQKAFGLPGGLFNVSALQIHGANLSANKLGTLNTASGIEA
DNATRLWELWYQQSFLNKRVDVKIGQQSLDQEFITSTYAALFLNTMFGWPALPSYDLPSG
GPAYPLAGLGVRVRGQLTPSLTALAGVYSGDPLGNNPNNMSGTNFNLHNGALWIGELQYA
INQPSDGEIVGTGGGGLPGTYKIGVWYNTNKFADQRFDNIGLSLANPASTGIPANHSGNY
SFYAVADQMVWRPDPDEPRSLGVFVRVMGAPGDRNLVQVAANLGVVLKAPFKGRDNDSAG
LALTYIKVGSHVNGLDKDFLAFNGSPYGVRTSETALEATYQYQINPWWQVQADAQYTFNA
GAGQNPNDPTQPLRNTFVVGVRTNINF
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgccccactcaagggactgcgcgccggcgcgcgtccgtcttgcgacccttca
gcacgtaccgcggcaattcatcgtacgcttttgccttcgatgcggcgcgttgcactgtgt
acggtcttcgcgtctgcttcgttgaccggccacgcggcgctggccgaagccaatcccgat
gggaacccggaagcgcccgaagccgacctgagcattgagacgacgcagaccaaggagtcg
accggcttctgggatcgtcagcagatgctcggcgacatgggcggcctgcgtccgtggctc
ggcaagtacggcatgaccttcacgctgaccgaaaccagcgaagtgctggccaatctacgc
ggcggtctcgcgcgcggcgccgactacgacggcctgaccaccgccaccttgcagatggat
acgcaaaaggcgttcggcctgccgggcggccttttcaacgtcagcgcgttgcagattcac
ggcgccaacctgagcgcgaacaagctcggcacgttgaatacggcgagcggcatcgaggct
gacaacgcgacacgtctgtgggagctctggtatcagcagtcgttcctgaacaagcgcgtc
gacgtgaaaatcggtcagcagagtctcgaccaggaattcatcaccagcacgtatgcggcg
ctgttcctcaacacgatgttcggctggcccgcgctgccctcgtacgacctgccgtcgggc
ggtcccgcctatccgctcgcgggtctcggcgtgcgcgtgcgcggccagctcaccccttcg
ttgaccgcgctggccggcgtgtattcgggcgacccgctcggcaacaacccgaacaacatg
agcggcacgaacttcaacctgcataacggcgcgttgtggatcggcgaactgcagtacgcg
atcaaccagccgtccgacggcgagatagtcggcacgggcggcggcggtctgccggggacc
tacaagatcggcgtctggtacaacaccaacaaattcgccgatcagcgttttgacaacatc
gggctatcgctcgcgaatcctgcgtcgacaggcattcccgcgaatcacagcggcaactac
agcttctatgcggtcgccgaccagatggtgtggcgccccgaccccgacgaaccacgcagc
ctcggcgtgttcgtacgcgtgatgggcgcgccgggcgaccgcaatctcgtgcaagtcgcg
gccaacctcggcgtcgtgctgaaggcgccgttcaagggccgtgacaacgacagcgccggc
ctcgcgctgacctatatcaaggtcggcagtcacgtgaacggactcgacaaggacttcctg
gcattcaacggtagcccgtacggcgtgcgcaccagcgaaaccgcgctcgaggcgacctac
cagtaccagatcaatccgtggtggcaggtgcaggccgacgcgcaatacacgttcaacgcc
ggtgcgggccagaacccgaacgacccgacgcagccgctgcgcaatacgttcgtcgtcggc
gtgcggaccaatatcaacttctaa
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