Paraburkholderia atlantica CCGE1002: BC1002_6245
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Entry
BC1002_6245 CDS
T01217
Name
(GenBank) YD repeat protein
Organism
bge
Paraburkholderia atlantica CCGE1002
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
ADG20105
UniProt:
D5WLK9
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All DBs
Position
3:complement(702990..706424)
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AA seq
1144 aa
AA seq
DB search
MTTGLAGIGGELVGLPGVVLPVAGVGPLLDRCERLGELVDRFRMRRALSGILCGSVDVIS
GSKICLPADETDFSLRGRLPLAWSRCYSSAQYALGLLGVGWRTNWEVTLHKRDDQLLYTD
EYGSTLSVPFPEHGTQVIAAAAQLHIAHLSDGRLVVADLTPHYRVFGDFDANGIARLKYV
EDLRQQRIGLIWDSDGRLLRMRGTCGHELRMHYEARMGPRLSAVECVDGGPTGALVQYGY
SQHGELTEVRNRVGEIVRRFTYRDGRIVEEADALGMVTRYVWQTIGGAARVARRLTSEGA
RERFAYDFDSKASEVSDVFGNAAHWQYDEQGRVLSHTDFDGRRYRFGYGAAVAPLTLQLP
GERVVRVEYDALGRVACETDLQGATRSTQYAFASREPVSVALSDGRAWMWARNDRLQPLH
YQTPSGELTRFEYGDDGDVVRSTDAQGGATTFAHNACGQVTHRTGIGGSTTRYEYDVNGY
VVSVTDALGAVTRIERDGLGRPLTITRPDGQAERHVWNAAGQRTSFVGPSGRSRHWYRDR
RGNVVRAVDEEGHVIVRRYDAHGRPVRIESANGAVQVLRWNASSCLSITDADGVERSFEY
AASGQVSCLTWKAAGQQRCETFDYDRAGRLIQRDTAHNRYMYHYGPRGLLDCVSREPTPE
GELLGIGADEIRFEHDAGGRLIAEHGANGTLRYTYDAAGRVVAIQLPQGQELRMRRFETG
DIAFIELDERQIARFWYDAMRRPVARTQGRLRTHTGFSPLGLPVWWRSVTGPDVDTPGFA
TEPVTELWREADYSPADLIARTAGEGEGQTWYDYDRRGCLLRSVSEKGDIEYFTWDAAGN
LLDTPGGSWFPAVYPDHRLRESRGHRYDHDVWGQLVRRSGRDHALSLDWDAEGRIIAAHR
QGYTVRYQYDAIGRRIAKRVESTVPRSAQQLSMPERDEVTRFLWQGHRLIQQHRAMELRT
YLYQPEPDGSTGFAPLACVDQTLAPDGAIKSTQVYHYHTDVAGTAVALTDETGRVVWRRR
YRAWGSLVTPEWQSSDAFAQPLRYAGQYADDETKLYYNGARFYDPHAGRYISPDRNGEAG
ASPYCYAPNPLMWCNPLGRATPEASPCVVVADASCVDGASDSAQYVAGVVEQLHDVTGWD
PAKF
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgggactcgcgggcatcggcggcgagctggtcggactgcctggcgtcgtattg
cccgtcgccggtgtcggaccgttgctcgatcgctgtgagcggctcggcgagctggtcgac
cgctttcggatgcgtcgtgcgttatcgggcattctgtgcggctcggtcgatgtgatcagc
ggcagcaaaatctgcctgcctgccgacgaaaccgacttcagtctgcgaggccgtcttccg
ctcgcatggtcgcgttgttattcgagcgcgcagtacgcgctcgggctgctcggcgtcggt
tggcgcacgaactgggaagtcacgctgcataagcgggacgatcaactgctctacacggac
gaatacggcagcacgctcagcgtgccgtttcccgagcacgggacgcaggtgattgcggcg
gcggcgcaattgcacatcgcgcatctgagcgacggacgcctcgtcgttgcggatctgacg
ccgcattaccgcgtgttcggcgatttcgacgcgaacggaatcgctcggctcaaatatgtc
gaggatctgcgtcagcagcggatcggcttgatctgggactccgacgggcgcttgctgcgc
atgcgcgggacctgtggccatgagctgcgcatgcactacgaagcgcggatgggaccgcgt
ttgagcgctgtcgagtgtgtcgacggcggtcctaccggcgcgctggtccagtacggctac
agccagcatggcgaactcaccgaggtgcgcaaccgggtcggcgaaatcgtgcgtcgcttt
acataccgcgatgggcggatcgtcgaagaagcagacgcgctcggcatggtgacgcgctac
gtatggcagacgatcggcggcgccgcgcgcgtggctcgacgactcacgtcggaaggcgcg
cgtgagcgcttcgcctacgacttcgatagcaaggccagtgaggtcagcgatgtcttcggc
aacgcggcgcattggcaatacgacgagcagggccgcgtgctgtcgcacacggacttcgac
ggccgacgctaccggttcggctacggcgccgccgtcgcgccgctcaccctgcaactgccc
ggcgagcgggtggttcgcgtcgaatacgacgcgctcggacgggtcgcgtgcgagacggac
ctgcagggcgccacccgctcgacgcagtatgcgtttgcgtcacgtgagcctgtgtcggtc
gcgctaagcgatggccgggcgtggatgtgggcacgcaacgatcgcctgcagccattgcac
tatcaaaccccgtcgggagaattgacgcgtttcgaatatggcgacgatggcgatgtcgtg
cgctcgacggatgcgcaggggggcgccacgaccttcgcccataacgcgtgtgggcaggtg
acacatcgcacaggcatcggcgggagtacgacgcgctatgagtacgacgtcaatggttac
gtcgtcagcgtgaccgacgcgctcggcgccgtgacgcgaatcgagcgcgatggcctcggc
cggccgttgaccatcacgcgtccggacggacaggcggagcgtcatgtgtggaatgctgct
ggccagcgcacgtcgttcgttggcccgagcggccgaagccggcattggtatcgagaccgg
cgcggcaatgtcgtacgcgcggtcgacgaagaggggcacgtgatcgtgcgtcggtacgat
gcgcatgggcgtccggttcgaatcgaaagcgcgaacggcgcggtgcaggtgcttcggtgg
aatgcgagcagttgcctgtcgatcacggacgccgatggcgtggaacgtagcttcgagtat
gcagctagtgggcaggtcagttgtctcacgtggaaggcggccgggcaacagcgttgcgaa
accttcgactatgaccgtgcgggccgtctgattcagcgtgataccgcgcataaccgctat
atgtatcactacgggccacgcggattgctcgactgcgtgagtcgcgagccgacaccggaa
ggcgagctactcggtatcggagcggatgagatccgcttcgaacacgacgccggtggccgt
ctgatcgccgagcacggcgcaaacggcacactgcgttacacgtacgacgccgctggccgt
gttgtcgcgatccagctgccgcaggggcaggagttgcgtatgcgccgcttcgaaaccggc
gacatcgcgttcatcgaactggacgaacggcagattgcgcgtttctggtatgacgcgatg
aggcgtccggttgcgcgcacgcaaggtcgcttgcgcacgcatacgggcttttcgccgctc
ggcttgccggtgtggtggcgctcggtgacgggacccgacgtggatacgccgggcttcgcg
acagaacctgtcaccgaattgtggcgcgaagccgattacagtcccgctgacctgatcgcc
aggacggccggcgagggcgaaggtcagacgtggtacgactacgaccggcgtggctgtctg
ttgcgctcggtgtcggagaagggggacatcgaatatttcacgtgggatgccgctggcaat
ctgctcgatacgcctggcggaagctggttccccgccgtatatccggaccaccggttacgg
gaaagccgcggacatcgttacgaccatgatgtgtggggacaattggtgcgtagaagtggc
cgcgaccatgcgctatcgcttgattgggatgcggaggggcgcatcatcgccgcgcatcgc
cagggctataccgtgcgctatcagtacgacgcaatcggtcggcgtatcgccaagcgtgtc
gaatccactgtgccacggagtgcgcagcagttatcgatgccggagcgcgacgaggtcacg
cgcttcttgtggcaaggacacagactgatccagcagcaccgcgcgatggaactgcgcacc
tacctatatcaaccagaacccgacggctcaaccggcttcgcgccgctcgcctgcgtggac
cagactctcgcccctgatggcgcgatcaaaagcacgcaggtctatcactatcacactgac
gtcgccggtacggccgtcgcgctcacggacgagactggccgggtcgtatggcgtaggcgt
tatcgtgcgtggggcagtctcgtgacgccggagtggcaaagcagcgacgcgtttgcgcag
ccacttcgctatgccggccaatatgcggacgatgaaaccaaactgtattacaacggtgcg
cgcttctatgatcctcacgcgggccgctacatcagccccgatcgcaacggcgaagctgga
gccagtccgtattgctacgcgccgaatccgctgatgtggtgcaatcctcttggccgcgcg
acgccggaagcgtctccttgcgtcgtcgtcgcggacgcgtcatgcgtcgatggcgcgtcg
gactcggctcaatacgttgccggcgtcgtcgaacaactccacgacgtaactggctgggac
ccggccaagttctga
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