Blastomyces gilchristii: BDBG_07849
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Entry
BDBG_07849 CDS
T06540
Name
(RefSeq) transcription initiation factor TFIIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03022
Basal transcription factors
bgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BDBG_07849
09124 Replication and repair
03420 Nucleotide excision repair
BDBG_07849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgh03021
]
BDBG_07849
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_07849
Transcription machinery [BR:
bgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BDBG_07849
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BDBG_07849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
8502090
NCBI-ProteinID:
XP_031580420
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDSDDEYIAHASDHDLDEILEDDDDVDDDIDSGPAASSASGPRRRRAAAGSSAAATAAA
QSSRDAKKKKKGRGGAEWEVSRTWESLVESADGTISATVEGLLEAGKRKRLLRDTTPLQR
GIIRHLILVLDLSSAMAEKDLRPTRYLLTLRYAQEFVLEFFEQNPISQLGVLGMRDGLAV
RISDMSGNPTDHILAIQSLRPKDPKGMPSLQNTLEMARGALFRTPTHGTREVFIIFGALL
SSDPGDIHKTINTLVADKIRVSIIGLAAQVAICRDICARTNNGDDSGYGVALNEQHFREL
FMNVTTPPATTVAPTPTTTKEETKTSQTTTSSLLMMGFPSRTLSPTTTPTLCACHSKPSR
TGYLCSRCGAKVCTLPTSCPCGGLPWFLSPPRPLLPSPLSAVELGRGVRGPRCEEKECQL
FCVCGWVSAGRKAIFRGGARGAERSREKGKGRRSRGHLGLALVGAMSVPFASVIFALIAM
CLRMRLCIIVPGVRVGLCSNCSSSSSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcagacgatgaatacatcgcccacgcctcagatcacgatctggacgagatc
ttagaagacgacgacgatgttgacgatgacatagactccggtcccgctgcctcctccgcc
tccgggccccggcgccgtcgagcggccgcaggaagctcagcagctgcaacagcagcagcg
caatcgtcgcgagatgctaagaagaagaaaaagggccgtggaggcgccgagtgggaggtg
tccaggacctgggagtcgctcgttgaaagcgcggatggcaccatcagcgcgacagtagag
ggtctgctggaggccgggaagaggaagagactactccgcgataccacccccctccaacgc
ggcatcattagacatctcatcctcgtcctcgacctctcctctgccatggccgaaaaggac
ctccgcccaacccgctatctcctaaccctccgctacgcccaggagtttgtcctcgagttc
ttcgaacagaaccccatctcccagctcggcgtgctaggcatgcgcgacggtctggccgtg
cgcatcagcgatatgagcgggaaccccacagatcatatcctagctatccagtccctccgc
ccaaaggaccccaagggcatgccatctctgcagaataccttagagatggcccgtggtgcg
cttttccgtacaccaacacacggcacccgcgaagtgttcataatcttcggcgccctcctc
tcctccgacccaggtgacatccacaaaaccataaacaccctggtcgccgacaaaatccgc
gtctccatcatcggcctcgccgcccaagtcgctatctgccgcgacatctgcgcccgcaca
aacaacggcgacgacagcggctacggcgtcgccctcaatgagcagcatttccgcgaacta
ttcatgaacgtcacaaccccacccgccacaaccgtcgctcccacaccaacaacaacaaaa
gaagaaacaaaaacgtcacaaacaacaacaagctccctcctgatgatgggcttcccctcc
cgaaccctcagcccaaccaccaccccaactctatgcgcctgccactccaaaccctcgcgc
accggctacctctgctcccgctgcggcgcaaaagtctgcaccctccccacctcctgcccc
tgcgggggcctcccgtggttcctctcaccacctcgcccgctccttccatcacctctttcc
gctgttgaactgggtcgaggtgtccggggcccccgctgcgaggaaaaggagtgccagctg
ttttgcgtgtgcggttgggtttccgcaggtcgtaaagcaattttccgggggggagcaaga
ggggccgagaggagcagggagaaggggaaggggagacggtcaaggggccatctgggatta
gcgttagtgggcgctatgagtgtcccgtttgcgagtgtcatttttgcattgattgcgatg
tgtttgcgcatgaggttgtgcataattgtcccgggtgtcagagtggggttgtgcagcaac
tgcagcagcagcagcagcagttga
DBGET
integrated database retrieval system