KEGG   Blastomyces gilchristii: BDBG_08043
Entry
BDBG_08043        CDS       T06540                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03030  DNA replication
bgh03410  Base excision repair
bgh03420  Nucleotide excision repair
bgh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BDBG_08043
   03410 Base excision repair
    BDBG_08043
   03420 Nucleotide excision repair
    BDBG_08043
   03430 Mismatch repair
    BDBG_08043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgh03032]
    BDBG_08043
   03400 DNA repair and recombination proteins [BR:bgh03400]
    BDBG_08043
Enzymes [BR:bgh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BDBG_08043
    6.5.1.6  DNA ligase (ATP or NAD+)
     BDBG_08043
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BDBG_08043
DNA replication proteins [BR:bgh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BDBG_08043
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BDBG_08043
DNA repair and recombination proteins [BR:bgh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BDBG_08043
   NER (nucleotide excision repair)
    Other NER factors
     BDBG_08043
   MMR (mismatch excision repair)
    Other MMR factors
     BDBG_08043
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C CFAP61_N
Other DBs
NCBI-GeneID: 8501963
NCBI-ProteinID: XP_031580519
LinkDB
Position
Unknown
AA seq 1014 aa
MHHPPLLFPRCRINPTHFKATPHNFIPRSQLPIWRRPIASTPRYEGRNRPFSILNCTAAA
GISRSRIGKRGFCASSVLTSVIVLRNKSLTTRRGGAEMAQKGGGARQATLGYVRDPQLSI
GKFFGANAGSASLPKKQSTLTFSRPGSRRKQEDGAATKTNEAEVLENNDKDVNMDDVATG
KEPKVESSKRSETPAVEKEASDEDSAGENSRSGSDSPESQKLKREKSPVEESEEFDVQPV
TKRRKRASPEKKRVSSNAKAAGKKAAASPTQKVRTRSPKKVKEEVTFEDKESSSAEQEDD
ISENGDELAEEKPKIAQKKREMVQHALKDSGKDPYPDWKPGAPVPYAALCTTFSLIEMTT
KRLIILSHCSLFLRQVLRLTPNDLLPTVQLMLNKLAADYAGIELGIGESFIMKAIGESTG
RSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKTQGHGSQEKK
ISAIKKLLSSADAALAGKGPKGIDITHNKGGPSEAKFIIRFLEGKLRLGLAEKTVLVALA
HAMVAHEVEVQGKKAPSTEELAKGEAILKSVYSELPSYEVIIPAMLEHGIFNLKDKCKLQ
PGVPLKPMLAKPTKSITEVLDRFEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQ
KDGEGVCAIFSRNSEDLSKKYPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPFQQ
LMTRKRKDVKAEDVKVKVCVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEGEFVFAQ
HGDTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDS
LDLVVLGAYYGRGKRTSVYGAFLLAAYNPNTQNFETVCNIGTGFSEALLEELHKALSPLV
IDRPKPFYDHSSVPKDQPDVWFEPKYVWEVKAADLTLSPRYKAAADEVMGIASAGSNGTV
KGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKDTAGKGGVDDDFEY
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgcaccaccctcccctcctcttcccgcgctgcagaatcaacccgactcatttcaaggct
acaccacataattttattccacggagccaactcccaatctggcgccgccccatcgcgagc
acgccgcgctacgagggaagaaatagaccgttctccatcctcaattgcacagcggcagcc
ggtatctctcgttcccggattgggaagcgcggattttgtgcctcttctgttcttacttcg
gtaatcgtcctgcgaaataagagcttgacgactagacgtggtggagcggagatggcgcag
aaaggaggtggtgcgagacaggctactttggggtatgttcgcgatccgcagttaagtatt
gggaagttcttcggtgccaatgctgggtctgcatcgctcccgaaaaaacagtccactctg
acgttttcgaggccaggcagcagaaggaagcaagaagatggagctgcaacaaagacaaac
gaagcagaggtactagagaataacgataaggatgtgaatatggatgatgttgcgactggc
aaggaaccaaaggtcgagagtagtaagcgcagtgagactcctgctgtcgaaaaggaggca
tcagacgaggatagcgcaggtgaaaactcgcgcagcggtagtgactctccagaatcacaa
aagctaaaacgggagaagagtcccgtggaggagagtgaagaattcgatgttcaaccagtc
acgaagaggcggaagcgtgcttcgcccgagaagaagcgtgtatcttcaaacgcaaaagct
gctggcaagaaagctgcggcttctccgacacaaaaagtgcggacaagatctccgaagaag
gtcaaagaagaagttacgtttgaagacaaggaatcctcatccgctgaacaggaagatgac
atttctgaaaatggtgatgaactagccgaagaaaagccgaagattgctcagaaaaagaga
gaaatggtccaacatgcattgaaggactctgggaaggatccttaccctgattggaaacct
ggagcgcccgtgccatacgcggcgctctgcacgactttctccctcattgagatgactact
aagcgactaattatattatctcactgctctcttttcctccgccaagttcttcgtcttaca
ccaaatgacctcctcccaaccgttcagctgatgctcaacaagttagccgccgactacgcc
ggcatcgaacttggaattggcgaatcattcatcatgaaagccattggcgaatccaccggc
cgcagcctggcagttatcaaggctgaccagcatgaaatcggcgaccttggcctcgtggcc
gcgaagagtcgctcaaatcagccaaccatgttcaagccgaaaccactgacggttaggggt
gtgcacgagggcctccttgccattgctaagacacagggtcacggatctcaggagaaaaag
atttccgctatcaaaaagctcttgtcgtctgctgatgctgctttggcaggaaaggggccg
aaagggattgatatcacacacaacaagggcgggccaagcgaagctaagttcatcattcgt
tttctcgagggtaaactgcgtcttgggcttgcggaaaagaccgtactcgtggcgctggca
catgcgatggtggcgcatgaggttgaggtacagggcaaaaaggcgcccagcactgaagag
ctggccaagggtgaagctattcttaagtccgtgtatagtgaacttccttcgtacgaagtc
attatccccgctatgctcgagcatggaatcttcaatctgaaggacaagtgcaagttgcaa
cccggagttcccctgaaacctatgttggccaagcctacaaagtccatcacagaagttctt
gaccgcttcgaaggcaaaaatttcacatgcgagtacaagtacgatggtgagcgggcgcaa
atacactacgtcgcccgtgaagaaatacacaaatatgcttcgacggcgtcaaccttacaa
aaagacggggaaggcgtctgtgccatcttctcgcggaattcggaggacttgtcaaagaag
tatccggatatccttggtaagttggagagctgggtaaagaaaggtacaactagtttcgtg
ctggactgcgagaccgttgcgtgggatatggtcaacaagaaagttttgccattccagcag
ctcatgacgaggaagcggaaggatgttaaggcagaggatgtcaaggttaaagtctgtgtt
tttgcgtttgatttgctatttttgaatggacaggcgactgtgaaaatgaccttacgagaa
cgaagggctcttttgcacgaggctttcacgccaattgaaggcgaatttgttttcgcccaa
cacggagacactaatgacctcgatgagatccagaccttgcttgacgagagtgtaaaagcg
tcatgtgagggtctgatggtgaaaatgctcgacaccgaagaaagcggttatgaacccagc
aaacgcagtcgaaactggcttaaggttaaaaaagattacctcgccggcatcggcgactct
cttgacctcgtcgtcctaggcgcctactacggccggggtaaacgtacatccgtctacggc
gctttcctcctagccgcctacaaccccaacacgcaaaacttcgaaacagtctgcaacatc
ggcacaggcttctccgaagcgctcctcgaagagctccacaaagccctttccccgcttgtc
atcgaccgtcccaaaccattctacgaccactcttccgtccccaaggaccagccggacgtc
tggttcgaacccaagtatgtctgggaggtgaaggcggcagatctgacgcttagtccgcgc
tacaaggctgcggcggatgaggttatgggtattgctagcgctggcagtaacgggacggtt
aagggtatttcgttgcggtttcctaggtatattaaggctcgggatgataagaaacctgag
gaatcgacgacgacgaggcaggtggcagagatgtatcggaggcaagagagtgtgagtaag
gacacggcagggaagggaggtgtggacgatgattttgagtattga

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