Blastomyces gilchristii: BDBG_09264
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Entry
BDBG_09264 CDS
T06540
Name
(RefSeq) transcription initiation factor TFIIH subunit 4, variant
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03022
Basal transcription factors
bgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BDBG_09264
09124 Replication and repair
03420 Nucleotide excision repair
BDBG_09264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgh03021
]
BDBG_09264
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_09264
Transcription machinery [BR:
bgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BDBG_09264
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BDBG_09264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
8501024
NCBI-ProteinID:
XP_002620336
UniProt:
A0A179V1I7
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAVSSSRSMDYLESLPGTVFRRLYQQPSTALAIFRRMLPHLAKCFVMALLYLKDPLPAAD
LELWVKPESKRERDNALSILGRLHILSNTTTSDNVRAYTVTDPFASSLRQALTGGNKQQS
FGVPSLTADENPMTVALLDDYARSQWEGVLGYMVGTSALGVQQAVTLSKGVKQLLQACHL
VEIRDRRVEITKDGFAFVLQDLNTQVWHILILYVENAEQIGMDSVEVLSFLFVLSSLELG
QSYEKKHLTSTQLKTLADLTDFGIVYQHPPHQEATRFYPTRLATTLTSDSITLGSSISSS
LTAPSGGPAAVSNEPGTGFIIIETNYRLYAYTSSPLQISLISLFTTLKYRFPNLITGKLT
RQSIRRAVEMGITADQIISYLTTHAHPQMRKYHASKSGANPAGVPAVLPPTVVDQIRLWQ
LERDRIKATPGFLFKDFVSLAEFEGPCRYAEEIGVLLWKSEKRRMFFVTRHEQVAAYLRS
RAGRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtcatcttcccgatcgatggactacctggaaagtttgccaggaactgtcttc
cgcagactctaccagcagccatccacggctctagcaatctttcggcgaatgttgccgcac
ctggcaaaatgtttcgtcatggcgcttctctaccttaaggatccgctgcctgccgcggat
ctagaactatgggtgaagccagagagtaaacgcgagagagacaacgcgctatcgatcttg
ggcagactccatatcctgtcaaatactactacctcggataatgtcagggcatatactgtt
acggatcccttcgcatcatcgcttcgacaggcccttacaggagggaataagcagcagtcc
tttggagttccgtccctaaccgctgatgaaaaccctatgaccgttgctctactagacgac
tatgcacggagtcagtgggaaggcgttctgggttatatggttggaaccagcgctctgggg
gtacagcaagcagtcacgctaagcaagggcgtaaaacaactcctccaagcctgccatctc
gttgaaatccgcgaccgaagagtcgaaatcacaaaggacggcttcgccttcgtccttcag
gacctcaacacccaagtctggcacatcttaattctctatgttgaaaacgcggaacaaata
ggcatggacagcgtcgaagtcctgtctttcctcttcgtcctcagcagcctcgaactcggc
cagtcatatgaaaagaaacatctcacatcgacccaactcaagaccctcgcagacctcact
gatttcggcattgtgtatcagcatcccccccaccaagaagcaactcgattctaccctact
cgcctagccacaacccttacctccgactctatcacccttggcagctccatctccagcagc
ctcaccgcacccagcggagggcccgccgcagtctccaatgagcccggaacaggcttcata
attatagaaaccaactaccgcctatacgcctatacatcctcccccctccaaatatcccta
atctctctattcacaactctaaaatatcgcttccccaacctcatcacgggcaaattgaca
cgccaatccatccgacgcgccgtagaaatgggcatcacggcggaccaaatcatctcctac
ctaaccacgcacgcccacccgcaaatgcgcaaataccacgcgtcaaaatccggcgcgaac
cccgccggcgttccagccgttctcccgcctacagttgttgaccagatccgtctctggcaa
ctggagcgggaccggataaaagccacgccaggcttcctgtttaaggacttcgttagtctg
gcggagtttgagggcccgtgtagatacgccgaggagattggggtgttgttgtggaagtca
gagaagaggcggatgttctttgtcacgcggcatgagcaggttgcggcgtatttaaggagt
agggctggaagaacctag
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integrated database retrieval system
