Bordetella genomosp. 13: CAL15_19855
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Entry
CAL15_19855 CDS
T05441
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
bgm
Bordetella genomosp. 13
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgm03016
]
CAL15_19855
Enzymes [BR:
bgm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
CAL15_19855
Transfer RNA biogenesis [BR:
bgm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CAL15_19855
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
FAD_binding_2
3HCDH_N
Pyr_redox_2
NAD_binding_8
Pyr_redox
FAD_oxidored
HI0933_like
TrkA_N
Sacchrp_dh_NADP
Lycopene_cycl
FAD_binding_3
GIDA
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ARP97560
UniProt:
A0A1W6ZK84
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All DBs
Position
complement(4419921..4421783)
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AA seq
620 aa
AA seq
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MSTSYTPLQPAAPALDSEGRLYSAIYQDVYHSRAEPLGQARVVFLRGNGLPQRWRGRGRF
TVCETGFGMGLNFLALWQAWRDDPQRPRRLHMVSIEGHPFDREALRQALRDHLPEALQAL
AGQLTDQWPPLLPGLHRLEFEGGSVTLTLAFGQADAVAPRLAARVDAYFLDGFAPRHNPA
MWAPEMLADLMRLAAPDATLASWTSVGSVRRALAELGFEVRREPGYGGKWHMISGVRSPT
APQGPALPDDDGAPVVVIGAGLAGAGVAHALALRGREVVVIDPGSAGGHKGHLAAALTPL
IARDDNPRARLSRAGSQRALRRWLALDQEAAPLRCGTLQLERDAGRAAALADTVTALGFP
SDWVRAVDGAEASRLAGLPVARGGAFFGDGLLVRPDRVVARLLAEPGITVVAGRAVGLVR
TDGGWRAHAQDGTLLGEAPHLVLANAAGAPALLSGCGLLDSLPRMAQMHALAGEVTLLPA
ASLAGGPRCVVGGDGYLLPAVDGWCVAGSTYVHGAAESRVGEAGQRVNLGKAAGLLADGT
SRLDALAPGTLPGWAGWRAVLPGRLPAVGQVPRAPGLWLATGYASRGLSWSALAGDVIAA
QLCGEPLPLESDLLAQLAPR
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtcctacacgcccctgcagcccgccgcgccagcgctggacagcgagggccgg
ctctacagcgccatctaccaggacgtctatcacagccgcgccgaaccgctgggccaggcg
cgcgtagtgtttcttcgcggcaatggcctgccgcagcgctggcgcgggcgtggccgcttc
acggtatgcgagaccggcttcggcatggggctcaatttcctggcgctgtggcaggcatgg
cgcgacgatccgcaacggccgcgccgcctgcacatggtatccatcgaagggcatcccttc
gatcgagaggcgctgcgccaggcgttgcgcgaccatctgccagaggcgctgcaggcgctg
gcgggccagttgacggatcaatggccgcccctgttgccgggcctgcaccggctcgagttc
gaagggggctccgtgacgctgacgctggcattcggccaggccgacgcggtcgcgccgcgg
ctggccgcccgcgtggacgcatatttcctcgacggcttcgcgccgcggcacaacccggcg
atgtgggcgccggagatgctggccgacctgatgcgcctggccgcgccggacgcgacgctg
gcctcgtggaccagcgtcggcagcgtgcggcgcgccctggccgaactgggcttcgaggtg
cggcgcgaacctggctatggcggcaagtggcacatgatctcgggcgtacgctcgccgacg
gccccgcagggaccggcgctgccggacgatgacggcgcgccggtcgtggttatcggggcg
gggctggcaggcgccggtgtggcgcacgcgctggcgctgcggggccgggaggtggtggtc
atcgatcccggttccgcgggcggacataaaggccatctggccgccgcgctgacgccgctg
atcgcgcgagacgacaacccgcgcgcgcgcctgtcgcgcgccggcagccagcgtgccttg
cgccgctggctggcgctggaccaggaggccgcgcccctgcgctgcggcactctgcaactg
gagcgcgacgcgggcagggcggctgcgctggcggatacggtcacggccctgggctttccg
agcgattgggtgcgagcggtggatggcgccgaggcgtcgcgattggcgggcctgcctgtc
gcgcgcggcggcgccttcttcggcgacggcctgctggtgcggccggacagagtggtggcc
cgcctgctggccgagccaggcatcaccgtggtggcagggcgggcggtcggcctggtccgc
actgatggaggctggcgggcgcatgcccaggatgggaccctattgggagaggcgccgcac
ctggtgctggcgaacgccgccggcgcgcccgcgctgctgagcggctgcggactgctggac
agcctgcctcgcatggcgcagatgcacgcgctggccggcgaggtcactttgctgcccgcc
gcatcgctggcgggcgggccgcgctgcgtggtgggcggcgatggctatctgctgcccgcc
gtggatggctggtgcgtggctggcagcacctatgtgcacggggcggcggagtcgcgtgtg
ggcgaggcggggcagcgcgtcaatctgggcaaggccgcgggactgctggccgacggcaca
agccgcctggatgccttggcgcccggcaccctgccgggctgggcgggctggcgggccgtg
ctgccgggtcggctgcccgcggtggggcaggtgccccgggcgccggggttgtggctggcc
acgggctacgcctcgcggggattgagctggtcggcgctggccggcgacgtgatcgccgcg
caattgtgcggtgaaccactgcccctggaatcggacctgctggcgcaattggcaccgcgt
tga
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