Burkholderia gladioli ATCC 10248: BM43_1308
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Entry
BM43_1308 CDS
T03826
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo00300
Lysine biosynthesis
bgo00470
D-Amino acid metabolism
bgo01100
Metabolic pathways
bgo01110
Biosynthesis of secondary metabolites
bgo01120
Microbial metabolism in diverse environments
bgo01230
Biosynthesis of amino acids
Module
bgo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BM43_1308 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BM43_1308 (dapF)
Enzymes [BR:
bgo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BM43_1308 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AJW98064
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Position
1:1413108..1413974
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AA seq
288 aa
AA seq
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MKLPFTKMQGAGNDFVVLDGTAGDLGLTPERVRALADRHFGIGADQLLLVERPSLDGVDF
KYRIFNCDGGEVEHCGNGARCFVKFVRDKGLTDKTTVRVQVKHGVITLSMQDNGEVVVDM
GSPVFEPARVPFNAAGLEGRHDGADTVYPLEVNGATRWISVVSMGNPHAVQLVDDAEAFA
VLEDGPVIERHARFPQRVNAGFLQIVSRREVKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDSPVAVQTHGGTLTIHWDGARDQAAPLYMAGPAVTVFDGAIELAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttccgttcaccaagatgcaaggcgccggcaacgacttcgtcgtgctcgacggc
accgccggcgatctcggcctcacgcccgagcgcgtgcgcgcactcgccgatcgccatttc
ggcatcggcgccgaccaactgctgctggtcgagcggccgagcctcgacggcgtcgatttc
aagtaccggatcttcaattgcgacggcggcgaggtcgagcattgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgacaagggcctgacggacaagaccacggtgcgcgtgcag
gtcaagcacggtgtgatcacgctgagcatgcaggacaacggcgaggtggtggtcgacatg
ggctcgcccgtgttcgagccggcccgcgtgccgttcaacgcggccgggctcgagggccgc
cacgacggcgccgataccgtctacccgctcgaggtcaacggcgcgacgcgctggatctcg
gtggtctcgatgggcaatccgcacgcggtgcagttggtcgacgacgccgaggccttcgcg
gtgctggaagacggcccggtgatcgaacgccacgcgcgcttcccgcagcgcgtcaatgcc
ggcttcctgcagatcgtctcgcgccgggaggtgaagctgcgcgtctacgagcgcggcgcc
ggcgagacgctcgcctgcggcaccggcgcctgcgccgcggtcgcggccgggatccggcgt
ggcctgctcgattcgccggtggccgtccagacccacggcggcaccctgacgatccactgg
gacggcgcgcgcgaccaggccgcgccgctctacatggcaggccccgccgtcaccgtgttc
gacggcgccatcgaactggccgactga
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