Biomphalaria glabrata (bloodfluke planorb): 106063468
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Entry
106063468 CDS
T07368
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106063468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgt03400
]
106063468
Enzymes [BR:
bgt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
106063468
DNA repair and recombination proteins [BR:
bgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106063468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
DNA_ligase_IV
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
106063468
NCBI-ProteinID:
XP_013077300
UniProt:
A0A2C9JHQ7
A0A9W3AFC0
LinkDB
All DBs
AA seq
916 aa
AA seq
DB search
MSSSHDSIKSQTVACAVKFSELCGLLEKIQKTQGNDKKRKVLQDFIEKWRACHKELHTNN
SSINDSFHPAMRLLLPHLERERVAYGIKEHTLAKLLIELLCLGQDSPDAQRLLNYKAPKT
AQAQAGDFANVAYFVLKNRCPNKGSLSISDVNRDLDAIASGNAAKAKETVRKHLMHLLTS
LNATEIKWLIRMILKELKIGLSQASVLNVFHPDAEELYNVNNSLEKVCVQLHDIKTRAYE
IGIEVFSPFTPMLGERASPDKVEKLMDNKPYLIETKFDGERVLLHKHGDEYKFFSRSGME
YTQVFGSNPYEGTLTPYISRCFKSNVQKCILDGEMMGYHAATKTFGTKGEQFDIKSRDVL
ERTGYQPCVQVFDVLLLNDKVLTNTPLRERLSLIDDVFTPVEGRIVKSVYKEALTRQDCA
DALNEAIDNKEEGIMVKLADSVYKPNTRKGGWFKIKPEYIGGLMDELDLLVVGGYFGVGE
RGGMVSHFLCAVAEPVSDGEMPTIFFSFCKVGSGYSKKQLKTFNELLSEHWQVYNKSKPP
KHLELASGFKEKPDVWLPPDKSKILQIKATEIIESDRFKTGCTLRFPRVEVIRDDKPWFQ
CMTTSELEDLRQKSGGKLAGTKYEMGALDEPIKKKRKVVSHSVRPTLMAQFKGADISNIK
QIGQVLVGKEFCVIDGPSNFPKQELETNIVQLGGTVVQNPDANTLCVIADKVAVKVKNLI
KTNKYNIVKVAWLIKVIETKSWVDWSPNDMIHMTQITKKLMEQNYDCYGDSYTVDVNEEA
LRHIFQGMGEDIPGVSQDDIREIEEEYFPYDSPFGLFRSCKVYIDNKLVLSDPGTAIPNC
SLDLLELELRFFGAETSDQLDSSISHVIVDESDLMRLHSLKEKRRTNDRKYHIMTEKWIK
ACIENGDLCPERTYEL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagccatgattcaatcaagtcacagactgtcgcctgcgctgtcaaattttct
gaactctgtgggctattagaaaagatacaaaaaactcaagggaatgataagaaaagaaaa
gtgcttcaggatttcattgagaaatggagagcatgccacaaggaactgcacacaaataac
tccagcattaatgactcatttcaccctgctatgaggttgttacttccccatcttgagaga
gaaagagttgcttatggcattaaagagcatacgttagccaagctccttattgaactactg
tgcctgggtcaagatagtccagatgctcaaagacttctaaattacaaggctcccaaaaca
gcacaagcacaagctggagactttgctaatgttgcatactttgttctcaaaaatcgctgc
cccaataaaggaagtctaagtatttctgatgtcaacagagacttagatgctattgctagt
ggaaatgctgccaaagctaaagaaactgtgcgcaagcacctgatgcatctattaacatcc
ctcaatgccacagaaattaaatggcttatacgcatgatcttgaaagagctaaagattggg
ttgagtcaagcatctgtgctgaatgtcttccatccagatgcagaggagctttacaatgtt
aacaacagtttggaaaaggtttgtgttcaacttcatgatatcaagacaagagcttatgaa
attggaattgaagtcttctctccatttacaccaatgttaggagaaagagcgtctccagat
aaggtagaaaaactgatggataataaaccttatctgatagagaccaagtttgatggggag
agagttttactgcacaaacatggagatgaatacaagtttttctctagaagtggtatggag
tacacccaggtgtttggctccaatccatatgaagggacattgaccccatacatttcaagg
tgcttcaagtctaatgtccagaagtgtattttagatggtgaaatgatgggctatcatgca
gctacaaaaacatttggaaccaaaggggaacagtttgacattaaatcaagagatgttttg
gaaagaactggttaccaaccttgtgtgcaggtttttgatgtgcttttgctgaatgacaaa
gtcttgaccaataccccattgagagaaaggcttagtctcattgatgatgtcttcactccc
gtagaaggaagaattgtgaaatctgtttacaaagaggctcttacaagacaagattgtgcc
gatgccttaaatgaagccatagacaacaaagaggagggcattatggtgaaacttgcagac
agtgtctacaaaccaaatactagaaaaggtggatggttcaaaatcaagcctgaatacatt
ggtggtctgatggatgaacttgaccttctagttgtgggtggatacttcggtgttggagag
aggggtgggatggtctctcatttcttgtgtgctgtggctgagccagtgtctgatggagag
atgccaacaatatttttctctttttgtaaggttgggtctggctacagtaagaagcaattg
aaaacttttaatgagctactgtcagaacactggcaggtatacaacaaatccaaacctcct
aagcatttagaactggccagtgggtttaaagaaaagcctgatgtttggttaccacctgac
aaatctaaaatactgcagatcaaggccacagaaattatagaaagtgatcgttttaaaact
ggatgtacactgcgttttcctagagtagaggtcatcagagatgacaagccttggtttcag
tgtatgacaacatctgaacttgaggacttacgacagaaatctggtggtaaattggctgga
actaaatatgaaatgggagctctagatgaaccaatcaagaaaaagagaaaagtagtcagc
catagcgtgcgtccaacacttatggctcagtttaaaggagctgacatatccaatatcaag
cagattggtcaagttctagtgggaaaggaattctgtgtgattgacggacccagcaatttc
ccaaaacaagaattggagaccaatattgtacaacttggtggaacggtagtccaaaatcct
gatgctaacactctgtgtgtcattgctgataaagtggcagtcaaggtgaaaaatctcatc
aaaacaaataaatacaacattgtaaaagttgcatggcttatcaaagtaattgagaccaaa
tcatgggtagattggtcaccaaatgatatgatacacatgactcaaatcactaagaaatta
atggaacaaaattatgattgctatggagacagttatacagtggatgtgaatgaagaagca
ctgagacatatctttcaaggaatgggtgaagatatcccaggagtctcacaagatgacatc
cgtgaaattgaagaagaatacttcccatatgattcaccttttggtttatttaggtcctgc
aaagtgtatattgataacaaactagtgctgagtgatccagggactgcaataccaaactgt
tcactggacttgttggaattagaattgcggttctttggtgcagaaacttctgaccaatta
gactcatctatctcgcatgtgattgtagatgaaagtgacttaatgagactgcattctctg
aaggaaaagagacgcaccaatgatagaaagtatcacattatgacagagaaatggatcaag
gcttgcattgagaatggagacctgtgtcctgaaaggacatatgaactctga
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