Biomphalaria glabrata (bloodfluke planorb): 106071700
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Entry
106071700 CDS
T07368
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03013
Nucleocytoplasmic transport
bgt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106071700
03015 mRNA surveillance pathway
106071700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgt03019
]
106071700
Messenger RNA biogenesis [BR:
bgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106071700
mRNA cycle factors
P-body specific factors
106071700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
106071700
NCBI-ProteinID:
XP_013087311
UniProt:
A0A2C9JX88
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MSLGQNAFTRAYINFLVPEDIFIFRDKFDGYVFLDAKGGEYPAIVEFAPFQKVPKKKPKK
VDAKNGVIEQDSDYKKFVENVSKPPEVPAVSLDAMVVEVETKENSFARSGSSRVSTPLLE
YLRKRREERKLNIAKLKEERRRGGGMRDSDRKRSGNDDLDRRKSSDKDRMRDRDRDRHNR
DRDRLRERDRIRDRRREKDPPRSDRLKEEKDGERKWMKDTEGTPKMLLRNTERDNVSYDN
IAASEKPTIVLERDKKEDKDVVQERLSEPDAGKGFRDRRSEEIRMKRSSGGTSKWDERRR
EDDRDRQRGGRVRGYDDDRGRSYKDQGARSFRDDADRRPLDRDKNRGERYTDRGYKYGSS
GGYRDKFKEDRGGNGRRGGYNDRDDGRGSGDRDRDERKGGLDREERRDAGKDREERRNVD
RDDRRDDRKIGAGDGWKRKELETKKFEKPVERKPEFVRSKISDDGKKEGSSSSGRESLGT
DSTRDDKSKEEDRSNRGGGPSDQQTGWVRGDAGSRSQRSTPDMSPPRHSKDDNDGRGDNT
EGDEKKRKKKDRPERQIYIPRRALERQRQSSPQTSESGKDRPKESSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttggtcaaaatgctttcacaagagcctacattaatttcctagttcctgaggat
atcttcatttttagggacaaatttgatggatatgttttcttggatgcaaaaggtggagag
tatccagccattgtggaatttgcaccatttcaaaaggtaccgaagaaaaagccgaaaaag
gttgatgcaaaaaatggagtaatagagcaagacagtgactataaaaagtttgtggaaaat
gtgtccaagccaccagaggtccctgcagtgtcccttgatgccatggttgtagaagtggag
acaaaagaaaatagctttgcaaggtctggaagcagtcgagtgtccactccacttctggaa
tacttaaggaagaggcgagaggagagaaaactcaacatagcaaaattaaaagaagaaaga
agacgaggaggtggaatgagagacagtgataggaaacggtctggaaatgatgatcttgat
cgccgaaagtcttcagacaaagataggatgagggacagggatcgggatcgtcacaacagg
gatcgagacaggctgagagaaagggacaggattcgagacaggagacgagaaaaagaccct
cctaggtcagacaggctgaaggaggaaaaagatggagaaaggaagtggatgaaagacact
gaggggacaccaaagatgcttttgaggaacacagagagggacaacgtgtcgtacgataat
attgcagcttctgagaagcctacgatagtcctggagagagataaaaaagaagataaagat
gttgtacaggagcggttgtcagagcctgatgctgggaaaggatttagagataggaggtca
gaagagatcaggatgaagagaagcagcggaggtacttctaaatgggacgaaagaagacgg
gaggatgatagagataggcaacgagggggcagggtcaggggttatgatgatgacagaggc
agatcgtataaagatcaaggagccaggagtttcagggatgatgctgatcgcaggccattg
gacagggataaaaaccgaggtgaaaggtacacagacaggggctacaaatacggcagcagt
ggtggttatcgtgacaagtttaaggaggacagaggaggaaatggcaggagaggaggctat
aatgacagggatgatgggagaggtagcggagacagggatcgagatgagagaaaaggtgga
ctagacagagaggagagaagagatgctggaaaggacagagaagagagaagaaatgtggac
agggatgacaggagagatgacaggaaaataggagctggtgatggctggaagaggaaagaa
ttggaaactaagaaatttgaaaagccagtggaaagaaaaccagaatttgtgagaagtaaa
atttcagatgatggaaagaaagaaggctcaagttcaagcggcagagaaagtctgggtaca
gattccaccagggatgacaaatcgaaggaggaggacaggtcaaaccgaggaggagggcct
tctgaccagcagacaggctgggtaagaggggatgccggcagccgatctcagaggtccacc
cctgacatgtctcccccacgccactcaaaagatgacaatgatggcaggggagacaacact
gaaggcgatgaaaagaaaagaaagaaaaaggacagaccagagcgtcaaatctacatccca
aggagagccctggagagacagaggcagagttctcctcagacttctgaaagtggtaaagac
aggcccaaagaatcaagctcatga
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