Biomphalaria glabrata (bloodfluke planorb): 106072025
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Entry
106072025 CDS
T07368
Name
(RefSeq) general transcription factor IIH subunit 4-like isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt03022
Basal transcription factors
bgt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106072025
09124 Replication and repair
03420 Nucleotide excision repair
106072025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgt03021
]
106072025
03400 DNA repair and recombination proteins [BR:
bgt03400
]
106072025
Transcription machinery [BR:
bgt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106072025
DNA repair and recombination proteins [BR:
bgt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106072025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
106072025
NCBI-ProteinID:
XP_013087728
UniProt:
A0A2C9KJJ6
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MSFGMKTLLCKDLHSYLRSLPPTVLDRLYCHPATCLAVFRDIPELARHYVMRLLFVDQAV
AQAVVQQWSTAPAEEQFEAAAALVELRVWYEKPLPGGMPGWLLNHIFRTNLMTALLGGGT
PWIGNKDLTPDKYTKDIPFLDKYALERWECVLHFMVGSNEGTDGVNKDITDVLLYSGLMR
VDDGEPSITAEGFQFLLLDTSAQVWFFLLQYLDTVQTRGMDLVECLTFLFQLSFSTLGKD
YCTEGMSENQLRFLQHLREFGLVYQRKRKSHRYYPTRLAVNIVSGLSKTKIDTHRPGFIV
VETNYRVYAYTDSPLQVALLALFCEMLYRFPNMVAANLSRGSVREALARGITADQIIHFL
HSHAHPEMLKRNPVIPSTVKDQIKLWELERHRFKFNDGVMYNQFLSQADFELLRNYAKDT
GVLVWEMPEKRVLIVTKSGHDDVKRFWKRLKASSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttggaatgaaaactctattatgcaaagacttgcattcttatttgcgaagtctt
cctcctacagttcttgatcggctttattgtcaccctgcaacatgcttagcagtttttcga
gatataccagaacttgctcgtcactatgttatgagacttctctttgtggaccaggcagta
gcgcaggcagtggttcaacagtggagcaccgctccagcagaagaacaatttgaagctgct
gctgcgttagtggagcttcgtgtttggtatgagaagccacttcctgggggcatgcctgga
tggcttctgaaccatatctttagaacaaacctgatgactgcattacttggaggtggaaca
ccttggattggtaacaaagatctcacaccagacaaatatactaaagacattcctttccta
gacaaatatgctttggagaggtgggagtgtgtattacacttcatggtaggatctaatgaa
ggaacagatggagtcaataaagacattacagatgttttattgtacagtgggttgatgaga
gtagatgatggggaaccctccattactgcagaaggatttcagtttttgttgcttgataca
tccgcacaggtttggttcttccttttgcagtatttggacacagttcagactcgtggaatg
gatcttgttgaatgtttaacttttctcttccaactgagtttctccacacttggcaaggac
tattgcactgaaggaatgagtgagaatcaactgaggtttcttcaacatcttcgagagttt
ggtcttgtttaccagaggaaacgcaagtcacaccgctactaccctaccaggcttgctgtc
aacattgtgtcgggtctgtcgaaaactaaaatcgacacacataggccaggtttcatcgtg
gtggagaccaattacagggtctatgcctacacagactctcccttacaggtggcactttta
gccttgttctgtgaaatgttgtacagatttcctaacatggtggctgccaacttatctaga
ggaagtgtaagggaagccctggctagaggaatcaccgctgatcagatcattcactttctt
cacagccatgctcatccagaaatgttgaaaaggaacccagtgatcccatccactgtgaag
gatcagatcaaactctgggaactggagcgtcacaggttcaaattcaatgatggggtcatg
tacaaccagttcttgtcacaggcagactttgaattgcttagaaattatgctaaggacact
ggcgtgttagtgtgggagatgccagagaagagagttttaatagtcacaaagtctggacac
gatgatgtcaagaggttctggaaacgtttgaaagcgtcatcatcctaa
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integrated database retrieval system
