Bordetella genomosp. 8: CAL12_11015
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Entry
CAL12_11015 CDS
T09515
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bgv
Bordetella genomosp. 8
Pathway
bgv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bgv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CAL12_11015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgv03021
]
CAL12_11015
Transcription machinery [BR:
bgv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAL12_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_11
HTH_40
HTH_29
HTH_Crp_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ARP81318
UniProt:
A0A1W6YJV0
LinkDB
All DBs
Position
complement(2385254..2385769)
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AA seq
171 aa
AA seq
DB search
MSGDELSVHQRTEALYSQHQPWLAGWLRHRMGGEDAAIDLAQDTFVRILAARELPVLAEP
RAFLATVARRLLANHYRRNAIERAYLDALALVPEQYAPDPEQRKLVLEQLYAIDAALDAL
PGKVREAFLLAQLEGLKHEEIAQRLGVTTRTVGNYMVRAVQACFFLQETAQ
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgacgagctgagcgtgcatcaaagaacggaagcgctttactcccagcatcag
ccctggctggcgggctggctccgccaccgcatgggcggcgaagatgccgccatcgatctg
gcgcaggacactttcgtgcgcatcctcgcggcccgcgaactgccggtcttggccgagccg
cgcgctttcctggccaccgtggcgcggcgcctgctggccaaccattaccgccgcaacgcc
atcgagcgcgcctatctggatgccctggccctggtgccggagcaatatgcgcccgacccg
gaacagcgcaagctggtgctggaacagctctatgccatcgacgccgcgctggacgccctg
ccgggcaaggtgcgggaagccttcctgctggcgcagctggagggcctgaaacacgaagag
atcgcgcagcgcctgggcgtgaccacgcgcaccgtcggcaactacatggtgcgtgccgtg
caggcatgctttttcctgcaagagacggcgcaatga
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