KEGG   Bordetella genomosp. 8: CAL12_11015
Entry
CAL12_11015       CDS       T09515                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bgv  Bordetella genomosp. 8
Pathway
bgv02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bgv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CAL12_11015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bgv03021]
    CAL12_11015
Transcription machinery [BR:bgv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CAL12_11015
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 GerE HTH_11 HTH_40 HTH_29 HTH_Crp_2 HTH_3
Other DBs
NCBI-ProteinID: ARP81318
UniProt: A0A1W6YJV0
LinkDB
Position
complement(2385254..2385769)
AA seq 171 aa
MSGDELSVHQRTEALYSQHQPWLAGWLRHRMGGEDAAIDLAQDTFVRILAARELPVLAEP
RAFLATVARRLLANHYRRNAIERAYLDALALVPEQYAPDPEQRKLVLEQLYAIDAALDAL
PGKVREAFLLAQLEGLKHEEIAQRLGVTTRTVGNYMVRAVQACFFLQETAQ
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtctggcgacgagctgagcgtgcatcaaagaacggaagcgctttactcccagcatcag
ccctggctggcgggctggctccgccaccgcatgggcggcgaagatgccgccatcgatctg
gcgcaggacactttcgtgcgcatcctcgcggcccgcgaactgccggtcttggccgagccg
cgcgctttcctggccaccgtggcgcggcgcctgctggccaaccattaccgccgcaacgcc
atcgagcgcgcctatctggatgccctggccctggtgccggagcaatatgcgcccgacccg
gaacagcgcaagctggtgctggaacagctctatgccatcgacgccgcgctggacgccctg
ccgggcaaggtgcgggaagccttcctgctggcgcagctggagggcctgaaacacgaagag
atcgcgcagcgcctgggcgtgaccacgcgcaccgtcggcaactacatggtgcgtgccgtg
caggcatgctttttcctgcaagagacggcgcaatga

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