Bacillus glycinifermentans: BGLY_1426
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Entry
BGLY_1426 CDS
T04537
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bgy
Bacillus glycinifermentans
Pathway
bgy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BGLY_1426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgy03400
]
BGLY_1426
Enzymes [BR:
bgy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BGLY_1426
DNA repair and recombination proteins [BR:
bgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BGLY_1426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
SCA85249
UniProt:
A0A1C3SC29
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All DBs
Position
1:complement(1444240..1446087)
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AA seq
615 aa
AA seq
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MAITMQPVLTSVPPSGEMWRYETKYDGYRALLTVSKTDVSLISRNGQPLNGLFPEIAIFA
KRKLTAFYDHLPFTLDGEIVSLANPFRSNFEYVQKRGMMKNQELIEKAAEKKPCHFLAFD
LLTYKGKTMTSSPYTERKQELSGLLKSLGFPMAPDPRSNERIQLIPETRDFDSLWSSIKR
FDGEGIVAKKKDSRWLENKKTAEWLKLKNYKRASVFMTGYNKANGYMSIAVSDRGHIREM
GSVSHGLGEQERNAILAIITEHGTETKPGEYVIDPSICLTVHYLTIHFGALREVSFVSFE
FDMTWEECTYTRLLLHSKNVHPSLQLTSLDKVIFPESNKTKADYVGYITEIGDVLLPFLE
NRALTVIRYPHGAGRESFFQKNKPDYAPEFVTSVKDDEHEHIVCRDYSVLFWLANQLALE
FHIPFQTVDTENPTEIVFDLDPPSKSEFPLAVRAAEELRRLFDQLGLVSFPKLSGNKGIQ
IYIPISKNAFTYEDTRLFTSFAASYCVSLFPDLFTTERLIKNRGGKLYIDYVQHAPGKTI
ICPYSARGNELGTVAAPLYWEEVGEKLSPADFTMEAVVKRTKEIGCPFESFFRQPQDKQI
KAILDHLKETGRAES
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccattacgatgcagcccgtccttacgtccgtgcctccttcgggcgaaatgtggcgg
tatgaaacaaagtacgacggctaccgggcgctgttgacggtttcaaaaacggatgtctcc
ctgatcagcagaaacggccagcctctgaacggtctcttcccggaaattgcgatatttgca
aaaagaaagctgaccgctttttacgaccaccttccgtttacgctcgacggcgaaatcgtc
tctttggcaaacccctttcgttccaactttgagtacgtgcaaaaaaggggcatgatgaaa
aatcaggaactgatcgaaaaagcggccgaaaaaaaaccgtgccactttctcgcctttgat
ctgctgacttacaaaggaaaaacgatgacatcctctccctatacagagcgaaagcaggag
ttatccggcctgcttaagagccttggatttccgatggcccccgatccccgttcaaatgaa
cggattcaattgatccccgagacgcgggattttgattcgctttggagctcaatcaaaagg
tttgacggtgaaggaattgttgcgaagaaaaaagacagccggtggctcgaaaataaaaag
acggccgagtggcttaaacttaaaaactataagagagcctccgtttttatgacggggtat
aacaaggcaaacggctatatgtcgatcgctgtttccgaccgcggacacatcagggaaatg
ggctctgtatcccacgggctcggagaacaggagaggaatgccatcctcgccatcataacc
gaacacggaaccgaaaccaaacctggagaatacgtcatcgatccttccatttgtttgact
gtgcattatttaacgattcatttcggtgcgcttcgcgaggtatcgtttgtctcttttgaa
tttgatatgacatgggaggaatgtacgtatacacggcttctgcttcattcaaaaaatgtg
cacccgtcattgcagctgacaagccttgacaaggtgatttttcctgaaagcaacaaaacg
aaagccgattatgtcggctatataaccgaaatcggcgatgttttgctcccttttttggaa
aaccgcgcacttaccgtgatccgatatccgcacggggcgggaagagaatctttttttcaa
aaaaataagcctgattacgccccggagtttgtgacttcagtcaaagatgatgagcacgaa
cacatcgtatgccgtgattactccgttttgttttggcttgcaaatcagcttgcgctcgaa
tttcacatcccttttcaaacggtcgataccgaaaatcctaccgaaatcgtattcgacctt
gatccgccgtcgaaatcggaatttccgctcgctgtccgcgccgcggaagagcttcgccgt
ttatttgatcagctcggcctcgtttcttttccgaagctgtccggcaacaaagggatacaa
atttatataccgatttcaaaaaacgcgtttacgtatgaagacacccgcctattcacaagc
tttgccgcatcatactgcgtatcgctttttcccgatctgtttacaacagaacggctgata
aaaaacaggggcggaaagctttatatcgactatgtacagcacgcgccgggcaaaacgatc
atctgcccgtattccgcaaggggaaatgagctcggcacggtcgcagctccgctttattgg
gaggaagtcggcgaaaagctgtctcccgccgattttacaatggaggctgtcgtaaaacgg
acaaaagaaataggatgccctttcgaaagttttttcagacagccccaggataaacagatc
aaagcgattctcgatcacttgaaagaaaccgggcgggcggaaagctga
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