Benincasa hispida (wax gourd): 120080026
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Entry
120080026 CDS
T07258
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120080026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhj02000
]
120080026
04147 Exosome [BR:
bhj04147
]
120080026
04090 CD molecules [BR:
bhj04090
]
120080026
Enzymes [BR:
bhj01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120080026
Transporters [BR:
bhj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120080026
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120080026
CD molecules [BR:
bhj04090
]
Proteins
120080026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_22
Zeta_toxin
ABC_ATPase
AAA_30
AAA_16
AAA_15
AAA_23
AAA_28
Pox_RNA_pol_35
Motif
Other DBs
NCBI-GeneID:
120080026
NCBI-ProteinID:
XP_038890487
LinkDB
All DBs
Position
6:10620765..10628135
Genome browser
AA seq
1249 aa
AA seq
DB search
MGKENGGDSERNKNNNKKKSRGMASIFMHADAVDKFLMTLGFIGAIGDGLTTPLVLIVSS
RLMNNIGQTSSISITDSFVANIDKNAVALLYVACGGFVACFVEGYCWTRTGERQAARMRA
RYLKAVLRQDVGYFDLHVTSTSEVITSVSNDSLVIQDVLSEKIPNFLMNAAIFVGSYLAA
VILFWRLAVVGFPFVVLLVIPGLLYGKTLMGLARESMEGYQKAGSVAEQAISSIRTVYAF
AGEDKTITEYSSALEGSVKLGIKQGFSKGLAIGSNGVSFAIWSFMSWYGSRMVMYHGAQG
GTVFAVGASIAVGGLSIGSGLSNIKYFSEACAAGERIMEVINRVPKIDSADMEGQILQNV
SGEVQFTNVQFAYPSRPDTMVLNDLTLTIPAGRTVALVGGSGSGKSTVISLLQRFYDPIG
GSIAVDGVGIEKLQLKWLRSQMGLVSQEPALFATSIKENILFGKEDATIDEVVEAAKASN
AHCFISQFPQGYDTQVGERGVQMSGGQKQRIAIARAIIKRPRILLLDEATSALDSESERI
VQEALDKAAVGRTTIIIAHRLSTVRNADLIAVLQNGQVMEIGSHNDLIRNQAGLYTSLVH
LQHKSPPEPPSSSISHIEKTTTTTTGSRRLPHLSRSSSANSGASDVVHETAPSSSNIEKE
QELPIPSFRRLLALNLPEWRQGLMGCSGAILFGAVQPLYAYAMGSMISVYFLHSHEEIKA
KTRTYALCFVGLAMFSFLVNILQHYNFAYMGEYLTKRVREMMLSKILTFEIGWFDQDEHS
SGAICSRLSKDANVVRSLVGDRMALIVQTISAVTIAFTMGLVISWKLALVMIAVQPLVIC
CFYTRRVLLKKMSNKAIKAQEQSSKLAAEAVSNLRTITAFSSQERILKMLEKAQEGPKRE
SIKQSWYAGIGLGCSQSLTTCSWALDFWYGGKLVAQGQTTAKALFETFMILVSTGRVIAD
AGSMTTDLAKGSEAVGSVFDVLDRFTKIEPDDPEGYKPNKLIGQIEINNVDFTYPSRPEA
MIFRGFSINIEAGKSTALVGQSGSGKSTIIGLIERFYDPIKGTINLDGRDIKSYHLRTLR
KHIALVSQEPTLFAGTIRENIIYGISRAVDESEIIEATKASNAHDFISGLKDGYETWCGD
RGLQLSGGQKQRIAIARAILKNPGVLLLDEATSALDGQSEKVVQEALERVMVGRTSVVVA
HRLSTIQNCDMIAVLDKGTVVETGTHSSLLEKGPSGAYYALVNLQRRSH
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaaaatggaggagattcagagagaaataagaataataataagaagaagagt
cgagggatggcgtcgattttcatgcacgccgacgccgtggacaagtttctgatgacgttg
ggtttcatcggagctatcggagatggcctcacaacccctctggtcttgatcgtttctagc
cgtctcatgaacaacatcggccaaacgtcttccatttccataactgattcttttgtagcc
aacatcgacaagaatgcagtggctctgttgtatgtagcttgtgggggatttgtggcttgt
tttgttgaaggatattgttggacgagaaccggagagagacaggcggcgagaatgagagca
agatatttaaaggcagttctccggcaagatgttggctattttgatctgcacgtgactagc
acgtccgaagttatcacctccgtttccaatgacagcttagtcattcaagacgtcttgagt
gagaagatcccaaacttcctgatgaacgcggcgatattcgtcggaagctatctcgcggcg
gtgatactattctggcggctggcggtggtcggattccctttcgtagtattgctagtgatc
ccaggccttctttacggcaaaacattaatggggttagctagagaaagcatggaggggtac
cagaaggccggatcagtggcagagcaggcaatttcatcgatccgaaccgtgtacgctttc
gccggagaagacaagaccataacggaatattcatcggcgttagaaggatcggtaaagtta
gggatcaaacaaggattttctaaaggattggccatcggaagcaatggagtttcgtttgca
atttggtcgttcatgtcttggtatggtagtcgaatggttatgtaccatggcgctcaaggt
ggcaccgtttttgccgtcggagcttccattgccgtcggtggattatcaatcggttcgggt
ttatcaaacataaagtacttttcggaagcatgtgcggccggtgagcgaatcatggaagta
ataaaccgggttcccaaaatcgactcggccgacatggaaggccaaatccttcaaaatgtc
tccggggaggttcagttcaccaacgttcaattcgcctacccttcccggcccgacaccatg
gtcctcaacgatctgaccctcacaattcccgcaggccgcaccgtcgccctcgtcgggggc
agcgggtccggtaagtcgaccgtcatctctttgttgcagagattttatgacccaattgga
gggagcattgcggtggatggagtgggaattgagaaattgcaattgaaatggctgagatcg
caaatggggcttgtgagtcaagagccggcgctttttgctacttcgattaaagagaatatt
ctgttcgggaaagaagatgccaccattgatgaagttgttgaagctgctaaagcttctaat
gctcattgttttatttctcagtttcctcaaggatatgatactcaggtaggggaaagagga
gttcaaatgtcgggaggacaaaagcaaagaattgccatagcacgagccataatcaagcga
ccacgaatccttctcctagacgaagccaccagtgccttagactcggaatccgagcgtatc
gtccaagaagccctcgacaaagccgccgtcggtcgcaccaccatcatcatcgcccaccgt
ctctccaccgtccgcaatgccgacctaattgccgtcctccaaaacggccaagtcatggaa
atcggttctcacaatgatctgatccggaaccaagctggcctttacacttccctcgtccac
ctccaacacaaatccccacctgaacctccttcatcctccatatcccacatcgaaaaaacc
accaccaccaccaccggcagccgccgcctcccccatctcagccgctccagctccgccaac
tccggagcctccgacgtagttcacgaaacagccccatcatcatccaacatcgaaaaagaa
caagaactcccaattccatcgtttcgaaggctattggctctgaatctgccggaatggaga
cagggtttaatgggctgcagtggggcaattttatttggcgctgttcagcctttgtatgca
tatgcaatgggatcgatgatttctgtgtatttcttacatagtcatgaggagattaaagcc
aaaacgaggacttatgcgctttgctttgttgggttggctatgttttcttttcttgtcaac
atactccaacattataacttcgcgtacatgggagaatatcttaccaaaagggttcgagaa
atgatgctttccaagatccttacatttgaaattggctggttcgatcaagatgaacattct
agcggtgcgatttgctcgagactatctaaagatgccaatgtggtgcgatccttggtgggg
gatagaatggctttaattgtgcaaacgatttcagctgtaactatagcattcacaatggga
cttgtgatttcatggaagctagcacttgtaatgatcgctgttcaacctttagtcatatgc
tgcttctacacaagacgagtgctcttgaaaaaaatgtcgaacaaagccattaaagcacaa
gaacagagcagcaagcttgcagcagaggctgtctctaaccttcgaacaatcacagcattc
tcttcacaagaacgcattctcaaaatgctagagaaagcccaagaaggcccaaaacgagaa
agcatcaagcaatcatggtatgctgggattggactcggctgctcccaaagcctcaccacc
tgttcatgggcgttggatttctggtacggcggaaaattagtagcacaaggacaaaccacg
gctaaagctctgttcgagaccttcatgattttggttagcaccggccgtgtaatcgccgat
gccggtagcatgacgacagatctcgctaaagggtcagaggcagttgggtcagttttcgat
gtcttggatcgattcactaagatcgaaccagacgatccagaagggtacaaacccaataaa
ttaatcggccaaatcgaaatcaacaatgtggatttcacttacccatctcgaccggaagcg
atgatatttcgtggcttttcaattaacattgaggctggaaaatccaccgcgttggttgga
caaagtgggtcaggaaaatccaccataatcggcttaatcgaacgattctacgacccgatt
aaaggaacaatcaatctcgacggtcgcgacatcaaatcgtatcatctccgaacgctgaga
aaacatatcgcattggttagccaagaaccgacgctattcgcaggaacaataagggaaaac
atcatatacggaatttcgagagcagtagacgaatcggagataatagaagcgacaaaagca
tcaaatgcacacgatttcatctcgggattgaaagatgggtacgagacatggtgtggagac
aggggattgcaattgtcaggaggccaaaaacagaggatcgccatagctagagcgatattg
aagaatccaggcgtactgttactagatgaagcgacaagtgcgcttgatgggcagtcggaa
aaggtggttcaggaggctttggagagggtaatggtgggaaggacgagcgtggtggtggca
cacaggctgagtacaatacagaattgcgatatgattgcggttttggataaagggacggtg
gtggaaacagggactcattcgtcgttgctggaaaaaggaccaagtggagcttattatgct
ttggtaaatttgcagaggaggtcccattag
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integrated database retrieval system
