Benincasa hispida (wax gourd): 120086882
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Entry
120086882 CDS
T07258
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120086882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhj02000
]
120086882
04147 Exosome [BR:
bhj04147
]
120086882
04090 CD molecules [BR:
bhj04090
]
120086882
Enzymes [BR:
bhj01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120086882
Transporters [BR:
bhj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120086882
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120086882
CD molecules [BR:
bhj04090
]
Proteins
120086882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
Zeta_toxin
RsgA_GTPase
ABC_ATPase
DUF87
AAA_30
AAA_21
AAA_7
P-loop_TraG
AAA
nSTAND1
APS_kinase
AAA_23
Cytidylate_kin
Motif
Other DBs
NCBI-GeneID:
120086882
NCBI-ProteinID:
XP_038899625
LinkDB
All DBs
Position
9:complement(59182490..59187835)
Genome browser
AA seq
1200 aa
AA seq
DB search
MLFGSLGAFVHGAALPVFFVLFGRMIDSLGNLSRHPHRSSSCIVENALYLIYLGLIVLAS
AWIGVAFWMQTGERQTTRLRMKYLKSILKKDINFFDTEAKDCNIIFHISIDMVLVQDAIG
DKTGHALRYFSQFLVGFAIGFTSVWKLTLLTLAIVPLVAIAGGAYTIIMSTLSGKGEAAY
AQVGKIVEEVIAXIRTVYLYVGESKAVEKYSESLQNALKLGKRSGFAKGIGVGFTYSLLF
CAWALLLWYASILVLHHEKNGGKAFTTIINVIFSGFALGQAMPNFVAIAKGRVAATNIFS
MIDTDYESSSRTKNGVALSNIEGKIEFSEVSFAYPSRPQLIFDKLSFSISAGKTVAVVGP
SGSGKSTIISMVQRFYEPSSGKILLDGHDLRSLELKWLRRQMGLVSQEPALFATTIAANI
LFGQEDATMDDIMXAAEAANAHSFIQELPDGYSTQVGEGGTQLSGGQKQRIAIARAVLRN
PKILLLYEATSALDAESKLIVQKALIRIMSNRTTIIVAHRLSTIQDVDTIIVLKNGQVVE
SGNHSELMSKNNQYATLVSLQVSSQVNDSTLISPSGSSRYSSFQEPFSFYNSIQDSKSFR
ETEIQSANKDLKMSNSPPPSILELLKLNAPKWPYAVLGSMGAILAGIRAPLFALGITHVL
SAFYSPHHSRIKDEVHHIAFMFVGVAILTIPIYLLQHYFYTLMGERLTARVRLLLFSAIL
SNEVGWFDFDENNTGSLTSVLASDATLVRSALADRISTIMQNVALTVSAFVIAFIFSWRL
AAVVVASLPLLIGASITEGFCGDYSRAYNRATAVAREAIANIHTVAAFGAEEKISSQFAF
KLNKPNKQALLRGHTAGFCYGISQFFPFCFYALGLWYASTLIKHKHSNFGNIMKSLMVLI
ITSLAIAETLALTPDIVKGSQTLGSVFNILHRNTIIDSNNPSSHMLTYIRGDIEFRNVSF
KYPARPDITIFENLNLRVSAGKSLAVVGQSGSGKSTVIALVVRFYDPITGTISVDSCDIK
SLNLRSLRMKIGLVQQEPALFSTTIYENIRYGNQEASEIEVMKAAKAANAHGFISRMPNG
YQTHVGDRGVQLSGGXKQRVAIARAILKDPSILLLDEATSALDAASEKQVQEALDRLMEG
RTTILVAHRLTTIRDANRIAVLKSGRVVEIGSHDSLLKNPNSIYKQLVNLQQETTVQSLV
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttggaagtttaggagcgtttgttcatggggctgctcttcctgttttctttgtt
ctgtttggtcggatgattgattctttgggaaatttgtccagacatcctcatagatcgtct
tcttgtattgttgagaatgctttgtacttgatctatcttggcctcattgtgttggcatca
gcatggataggtgtggctttttggatgcaaacaggggagaggcagacgacgaggttgaga
atgaagtatctcaagtcaattttgaagaaagatattaactttttcgataccgaggccaaa
gattgcaacataatcttccatatctcaattgatatggttttggttcaagatgcaataggt
gacaagacaggccatgctttgcgttatttctcccaattcttagttggatttgccattgga
tttacatcagtttggaaactgactcttctgactttggccattgttccattggtagccatt
gcaggaggtgcatacacaatcatcatgtccactttgtctggaaaaggtgaagctgcctat
gctcaagttggaaagatagttgaagaggttattgcatagattcgaacagtgtatttgtat
gtaggagagagtaaagcagtggagaaatactctgagtcgcttcaaaatgcattgaaactg
gggaagaggagtggttttgcaaaaggcattggcgtggggtttacatacagtcttctgttt
tgtgcctgggctttgctcctctggtatgccagcatactcgtcctccaccatgaaaaaaat
ggagggaaagctttcacgacaatcatcaatgtcatcttcagtggatttgcgctcggtcaa
gctatgccaaatttcgttgccattgcaaaaggtcgggtggctgcaaccaacatttttagc
atgattgacacagattatgaatcttcttcaaggactaagaatggagtagcattgtcgaat
atagaaggaaagattgagttttctgaggtttcctttgcttatccctcccgaccgcaattg
atttttgacaagttaagcttctcaataagtgctggaaagacggttgcagttgtcggcccc
agtggctcagggaagagcaccattatttccatggttcaacgtttctatgaaccgtcttca
ggtaaaatactattggatggacatgatcttaggtctcttgagttgaaatggttgagaagg
caaatggggttagttagtcaagagcctgccttatttgccaccacaatagctgccaatatt
ctttttggtcaagaagatgcaaccatggatgatatcatgncagctgctgaagctgcaaat
gctcattccttcattcaagaattaccagatggttactccactcaggttggagagggaggg
actcagctttcaggtgggcaaaagcagaggatcgccattgcaagggcagttctacgaaat
ccaaaaatattacttctatatgaggcaactagtgcacttgatgcagaatcaaaactcatt
gttcaaaaggcactgatcagaatcatgtcgaatcgaacaacaattatcgttgcacatcga
ctttcaacgattcaagatgtcgataccatcattgtcctgaaaaacggtcaggttgttgag
agtggaaaccattcagaattgatgtcaaagaataatcagtatgcaactctagtgagcttg
caagtatcaagccaagtgaatgattctaccctaatatcaccatctgggagttccaggtat
tcgagttttcaagaaccttttagcttttataatagtatacaagattccaagtcattcaga
gagactgagatacaatcagcaaacaaagatttgaaaatgtcgaattctcctcctccatcg
attttggaactactgaagttaaatgcacccaagtggccttatgcagtactaggatccatg
ggagcaattcttgcaggcattcgagctcctttgtttgcacttggcataactcatgtccta
tctgcattttattctcctcatcattcccgaatcaaagacgaggttcatcacatcgctttc
atgttcgtaggagttgctattctcaccattcctatatatctgcttcaacactacttctac
acattaatgggagagaggcttacagcccgtgttcgtttgctgttgttctcagctatcctt
tccaacgaagttggttggtttgattttgatgagaacaacactggttccttgacatcagtt
ttggcatctgatgcaacgttagtaagaagtgcgttggccgaccgtatatcgaccatcatg
cagaacgtagcgctcactgtgtctgcatttgttattgcctttatattcagttggcgcctt
gcagccgttgttgttgcttctttgccccttctgattggagcttcaataactgagggattt
tgtggagactatagtcgagcatataaccgcgcaacagctgtagcacgtgaagctatcgcc
aatatacacacagttgcggcatttggtgctgaagagaagatctcaagtcagtttgccttt
aaattgaacaaacccaacaagcaggcccttctgagaggtcatactgctggcttttgctat
gggatatctcagttcttcccattttgtttctatgcacttggcctttggtatgcatcaact
cttatcaaacataaacactcaaactttgggaacatcatgaaatctttgatggttttgata
atcacatcattagcaatagcagaaaccctggctcttacacctgatattgtaaaaggttca
caaacattaggatcagtcttcaatattctccatcgaaacaccatcatagattccaacaat
ccatcctcccatatgttaacttacatcagaggcgatatagaattcaggaacgtgagtttt
aaatacccagcaagaccagatatcacaatttttgagaacttgaatctaagagtttctgct
ggcaagagtctcgctgtagtaggacaaagtgggtcgggaaagagcaccgtgattgcattg
gtggtgagattttatgatcccattacgggaaccatctcagtcgacagctgtgacatcaaa
agcttaaacttgagatcactaaggatgaaaataggtttggttcaacaagaaccagctttg
ttttccacaacaatatatgagaatatcagatatggcaatcaagaggcatcagaaattgaa
gtaatgaaagcagccaaggcagcaaatgctcatggcttcatcagccgaatgccgaatggc
tatcaaacgcacgttggcgaccgaggagtgcagctctcgggaggcnagaagcagagagtg
gcaattgctagagcaatactaaaagatccttccattcttctgttggatgaagcaacaagt
gcattggatgctgcctctgagaagcaagtgcaggaggctcttgacaggctaatggaaggc
cggactacaattcttgtggcgcaccggcttacgaccatccgcgatgccaacagaatcgct
gtgctcaagagtggtagagtggttgagattggcagccatgatagcttactgaagaacccc
aacagtatctataaacagttggtgaatttgcaacaggaaacaactgtgcaatcgcttgtg
tag
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integrated database retrieval system
