Benincasa hispida (wax gourd): 120089903
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Entry
120089903 CDS
T07258
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120089903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhj02000
]
120089903
04147 Exosome [BR:
bhj04147
]
120089903
04090 CD molecules [BR:
bhj04090
]
120089903
Enzymes [BR:
bhj01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120089903
Transporters [BR:
bhj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120089903
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120089903
CD molecules [BR:
bhj04090
]
Proteins
120089903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_22
AAA_29
RsgA_GTPase
nSTAND1
AAA_5
AAA_25
DUF815
Rad17
DUF87
SBE2
Motif
Other DBs
NCBI-GeneID:
120089903
NCBI-ProteinID:
XP_038903267
LinkDB
All DBs
Position
11:58933531..58939925
Genome browser
AA seq
1360 aa
AA seq
DB search
MSQDSEEIKTIEQWKWSEMQGLELVSSDPLPPESFITNNPSAPTAKNTDPEDLRPTTEEA
QNGIGRATNREMESTSDSKKENGGGTSGEKPETVTAVGFGELFRFADGLDYVLMAIGSVG
ALVHGCSLPLFLRFFADLVNSFGSYANDVDKMMQEVLKYAFYFLVVGAAIWASSWAEISC
WMWTGERQSTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFI
HYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGGIYTTTIAKLSAKTQEALSEAGNIV
EQTIVQIRVVFGFVGESRALQRYSAALKISQKIGYKSGFSKGMGLGATYFVVFCCYALLL
WYGGYLVRHHATNGGLAIATMFAVMIGGLALGQSAPSMSSFAKAKVAAAKIYRIIDHKPT
LNRNNESGLELESVSGLVELKNVDFSYPSRPDVRILNNFSLTVPAGKTIALVGSSGSGKS
TVVSLIERFYDPISGEVLLDGRDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPD
ADQLEVEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLL
DEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDE
LFAKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSR
RLSDFSTSDFSLSLDASLPNYRLEKLAFKEQASSFWRLVKMNSPEWLYALLGSIGSVVCG
FLSAFFAYVLSAVLSVYYNPDHGFMSREIIKYCYLLIGLSSAALLFNTIQHFFWDIVGEN
LTKRVREKMLTAILKNEMAWFDQEENESAKIAARLALDANNVRSAIGDRISVIVQNTSLM
LVACTAGFVLQWRLSLVLVAVFPVVVAATVLQKMFMTGFSGDLEANHAKATQLAGEAIAN
VRTVAAFNSEEKIVRLFSTNLEIPLRRCFWKGQIAGSGFGVAQFSLYASYALGLWYASWL
VKHGLSDFSKAIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFALLDRKTEIEPDDP
DATPVPDKLRGEVEFKHVDFSYPTRPDIPVFRDLSLRARAGKTLALVGPSGCGKSSVIAL
VQRFYEPTSGRVMIDGKDIRKFNLKSLRKHMAMVPQEPCLFAASIYDNIAYGHESATEAE
IIEAATLANAHKFISGLPEGYKTFVGERGVQLSGGQKQRIAIARALIRKAELMLLDEATS
ALDAESERSVQEALDRACLGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGSHSHLLKNY
PDGCYARMIQLQRFTHSQVIGMTSGSTSSARTREDEGRES
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggagataaagacgattgagcagtggaaatggtccgaaatgcaa
gggcttgagctcgtctcttctgatcctcttcctcccgaatcatttataaccaacaaccca
tcagctccaacggcgaaaaacacagaccctgaagacctcagacccacaacagaagaggct
caaaacggaattggcagagccacaaacagagaaatggaatctacgagtgattccaagaag
gaaaacggcggtggcaccagtggggagaagcctgagaccgtcactgccgttggttttggt
gagcttttcagattcgccgatgggttggattacgttttgatggcaattgggtcggtcgga
gctcttgtccacggttgttctttgcctctgtttcttcgattcttcgctgatcttgttaac
tcctttgggtcttatgccaatgatgtggataaaatgatgcaggaggttttgaagtacgca
ttctactttctcgtggttggagctgcgatatgggcgtcatcctgggcagagatttcgtgt
tggatgtggaccggcgagcggcagtccacgaagatgaggatcaagtacctagaagcagca
ctggaccaggacattcagtattttgatacagaggttcgaacatctgacgtcgttttcgcc
atcaacactgatgcagtgatggtccaagacgccattagtgagaagctgggcaacttcatc
cactatatggcaacttttgtgtccggattcgttgtgggtttcactgctgtgtggcaattg
gcgttggtaactcttgcggtggttcctttgattgctgtaatcggcggcatctacaccacc
acaatagctaagctctctgccaagacccaggaagctctatcagaagctgggaatatcgtc
gaacagacaatagttcaaattcgagttgtttttggattcgtgggcgaatcaagagcactg
cagagatactccgccgcattgaagatttcccaaaagataggttacaagagtggattctcc
aagggtatgggattgggcgccacttactttgttgttttctgctgttacgcccttctgctc
tggtacggtggttatcttgtcagacaccacgccaccaatggcggtctggccatagccact
atgtttgcagtgatgattggcggactggcattggggcaatctgctccgagcatgagttca
ttcgctaaggctaaagttgcagctgctaaaatctaccgtatcatcgaccataagcctact
ctaaaccgcaacaacgaatctggtttggaattagaatcagtttcaggactggttgagctg
aagaatgtagatttctcatacccatcaaggccggatgtaagaatcctgaacaatttctcc
ttaactgtccctgccggaaaaactatagctctggttggtagcagtggctccggcaagagc
accgttgtctccctaattgaaagattctatgaccccatttcaggagaagttctactagat
gggcgtgacataaaaactttgaagctgagatggttaaggcagcaaataggattggtgagc
caagaacctgctctttttgctaccaccatcaaggagaatattctcttgggtagacctgat
gcagatcaacttgaggtggaggaagctgctcgagtcgctaatgctcattcattcattatc
aaacttcctgaaggctatgacacccaggtaggggaaagaggactgcagctttctggaggg
cagaagcagaggatcgcaatagcaagggcaatgcttaaaaaccctgcgatcctactctta
gacgaagctactagtgcattggactctgagtcggaaaagcttgtacaggaagctcttgat
cgttttatgatcgggcggaccactcttgttattgcccatcgactctctaccattcgcaag
gctgaccttgtggctgtactccaacaaggaagtgtttctgaaattggaacacatgatgag
ctctttgctaaaggagagaatggtgtatacgccaagctcatccggatgcaggagatggca
catgaaactgctctcaataatgccagaaagagtagtgcaaggccttcgagtgccaggaac
tcagtgagctcaccaatcattgcacgaaattcttcctatggacgatcaccatattcacgt
cgattatccgacttctccacatctgattttagtctttcccttgatgcttcacttcccaat
tacaggcttgaaaaacttgcctttaaggagcaagccagttctttttggcgtctcgtgaaa
atgaattcacctgaatggctttatgcattacttggttctattggctctgttgtttgtggg
tttttaagtgctttctttgcatacgttctaagtgctgttctcagtgtctattacaaccca
gaccatggtttcatgagcagagaaattattaagtactgctacttattaatcggactttcg
tccgctgctcttctcttcaatacaatacaacatttcttctgggatatcgtgggagagaac
ctcaccaaacgtgtaagagagaagatgctgacagcaatactgaaaaatgaaatggcatgg
tttgatcaggaggaaaatgagagtgcaaagattgctgcaaggctggccctcgatgctaac
aatgtcagatctgccattggagacaggatttctgtgattgtacagaacacatcactcatg
ctagttgcatgcaccgctgggtttgttttgcagtggcgcctatctcttgtccttgtagct
gtcttccccgtggttgttgcagccactgttctacagaaaatgttcatgactggtttttca
ggagaccttgaggccaaccatgccaaggccacacaactagcaggggaggcgatagccaat
gtaaggacagttgctgcattcaactcagaagaaaagattgtcagacttttttcaaccaac
ctcgagatcccactacgtcgttgcttttggaagggacagattgctggtagtggatttggt
gttgctcagttttctctttatgcttcctatgctcttggtctttggtatgcctcatggctt
gtaaagcacgggctctctgacttttcaaaggcaatccgtgttttcatggtccttatggtt
tctgcaaatggtgcagctgaaacactaactctagctcctgactttattaagggtggtcga
gccatgcgttcagtctttgcacttcttgatcgcaaaactgaaattgaacctgatgatcca
gatgccactccagtaccagataaacttcgtggagaagttgaatttaaacatgttgacttt
tcctacccaactcgtcctgatattcccgtctttagagaccttagtttgcgtgcccgagca
ggtaagactcttgctctcgttggccctagcgggtgtggcaagagctctgttattgcacta
gtccaaaggttctatgagccaacatcaggacgagttatgattgatgggaaggatattcgt
aagttcaatctcaagtccctgagaaagcacatggcaatggtccctcaggaaccatgctta
tttgctgcttccatatatgataatatagcttatggccacgaatcagccacggaagccgag
atcattgaagctgctactttggcaaatgcccataagttcatatctgggttaccagaagga
tataaaacttttgttggggagagaggagttcaactatcaggtggacagaaacaaagaatt
gcaattgcccgtgcactgatcaggaaggcagagcttatgttactagatgaggcaacaagt
gcactcgatgccgagtctgagcgatccgtccaggaggcgctcgaccgagcttgtttggga
aaaacaacaatcgtagttgctcatcgactatcaactattaggaatgctcatgtcattgca
gtaattgatgatggtaaagtttcagaacagggatcacactcacatttgttgaaaaattac
cctgatgggtgttacgccaggatgatacaattacaaagattcacacacagccaagtcatt
ggtatgacttcaggttcaacttcctcagcaagaactagagaggatgaggggagagagagc
tag
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integrated database retrieval system
