Benincasa hispida (wax gourd): 120090425
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Entry
120090425 CDS
T07258
Name
(RefSeq) DNA glycosylase/AP lyase ROS1-like
Organism
bhj
Benincasa hispida (wax gourd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
120090425
NCBI-ProteinID:
XP_038904008
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Position
11:complement(56589963..56600468)
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AA seq
1850 aa
AA seq
DB search
MNFGQPEGNKADVQGGSWIPATPMKPILPKPPLQPLIYARMDRNQPRPCWLGSERLFSNS
NKEVETSSRVACYGGANSMGADGSSEWAAARAGQFQVACNENGTVGIHSMDALGGIPFLQ
LMALADAASIVGADAALGGNASDLFDSGSSYQIELESSSTKDRLSGSCIPEATEYGISDH
GGQHTYDLNFPSGTESHAAAIRITSQFAPLTPDMGKIKYTERDTEVQQIPTENKQDEREQ
NHNCNTSIIIDGENLKENKELLEPAMHSTITATCTPDGKEGKNDGDLNKTPASRQRRRKH
RPKVIIEGKTKRTKPNLKTPSSNPSMRKRVRKSGVSKPSATPPIEVIGETSDQEMLKHRR
KSCRRAINFDTQAQTRDGTFESGPLEQGSLTQNIQSTTGLEEVRLEEVGSSTDPNWSMNQ
MLKRYESVSEKQALTTELSAEHNSSERKQPSKTQMENNTEQIGKVISNSEKGNVVETMLN
NDNRSLPGSSHGLIFCKNPTMTSREQATCCLRKRSRAIKQAHTGSINLTGAHYNTLSAYQ
SMSWMHFPHIYKKKRTEKGQNPVSSSAFTTATHFMRPESACSFNDPQRNYMVSKSNNWIA
GPQFNICKSRTVAGHGGNGVQDKLQTYGGIMALGQTEKTIKKPRTAKRLSGLAPSERIGH
CEKQPIYPTNHPPLASSAKNINTSGTCINGLFEMMHATVAKKKRTKKKPSNSALLNVNKD
LQDRRFVSFHSHQFFLKTLGTAPEHVNQMCFIDLIVEQLKHLDINKESNHLGYREQALVS
YNIQNQEQNAIVVYGRDGTIVPFNPIKKRRPRPKVELDEETGRVWKLLMGNINSEGIDGT
DEEKIKWWEEERKVFRGRADSFIARMHLVQGDRRFSQWKGSVVDSVVGVFLTQNVSDHLS
SSAFMSLAARFPPKPKCHQASCSQEPIIELDEPEECMLNLENGMNLNKQILHQQISEEGS
MKKNEMRKSEGRIIVDNNESSGSNVEDGSSNKGPEKISYSSSHNILETCSNSVGEISLTG
TSPMQACLYGEKETVDSFSCQDCLDLSIPQTSESIEPSSEGNSEDLPSCSTEAHIDSSEE
LIQMARLNTLNANYTIDTSVDQSENTTTNKLAEKCDGRIDDTFQPDDPEISLKDSIHHLS
GYQMQQNQTSKSLEVDCCQTCNGVQTSNDCQNKDEHFHTEQSTLTVESDNHYNVEIELVV
DIVEAPSTSSELSINAKEPDLTLQSQGSVIEDPQNVESPVECTNNVHEIPPNATEMAIQS
NPKEYDQLSNEFKEMNPASSRSQRKQVAKEKENNINWDNLRKQTETNGKTRQRTENTMDS
LDWEAIRCADVNEIAHAIRERGMNNMLAERIKDFLNRLVKDHGSIDLEWLRDVEPDQAKE
YLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYP
VLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHFASAFA
SARLGLPAPEDKRIVSTTECREPDDNQARTIDQPMLSLPPSTISSEEIKPSETHQSDGKT
TGSTCVPIIEEPATPEQESTTQDAIIDIEDAFYEDPDEIPTIKLNIEEFSQNLQNYVQKN
MELQEGDMSKALIALTPEAASIPMPKLKNVSRLRTEHQVYELPDSHPLLEKLKLDRREPD
DPSSYLLAIWTPGETANSIQLPERRCNQEHHQLCHEEECLSCNSVREANSFMVRGTILIP
CRTAMRGSFPLNGTYFQVNEVFADHESSLNPIDVPRDWIWNLPRRTVYFGTSIPTIFKGL
STQGIQHCFWRGFVCVRGFDQKTRAPRPLMARLHFPASKLNRGRGKTDDQ
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcggccaacctgagggaaataaggccgatgtccaaggcggttcttggattccg
gcgacacccatgaagcccattctaccaaaaccgccgctgcagccattgatctatgcaagg
atggacaggaatcagccacgaccatgttggttgggatcagagagactgttctcaaattct
aacaaggaagttgagaccagcagtagagttgcatgttacggtggagctaattccatggga
gctgatggttcttccgagtgggcagcagctcgggctgggcaatttcaagtggcctgtaat
gagaatggaacagtggggatacattctatggatgcactggggggcattccttttttgcag
ctaatggcactagcagatgcggcttctattgtgggtgctgatgctgcattgggtggaaat
gcgagtgacctgttcgattctggctccagctatcaaattgaattggagtctagctctacg
aaggatcgtctcagtggcagctgcatacctgaagccacagagtatggaatatctgaccat
ggcggccagcatacctatgaccttaattttccatctggaacagagtcacatgcagctgct
attagaattacctcccaatttgcccctctgactccagacatgggcaagattaaatatacc
gaaagagatacagaagtacagcagataccaactgagaacaaacaagatgagagagaacag
aaccacaactgtaatacttcaataataattgatggtgaaaacctgaaggaaaataaagaa
cttcttgaacctgcaatgcactcaacaattactgctacttgtaccccagatggaaaggaa
ggcaagaacgatggtgacctgaataaaacaccagcatcaagacagagaaggagaaaacat
agacctaaggtcataatcgaaggaaaaactaaaagaacaaaaccaaatttgaagacacct
agttccaatccaagtatgagaaagcgtgtcaggaaaagtggagttagtaagccttcagca
actcccccaatagaagtaataggtgaaacctcagaccaagaaatgctcaagcatagaagg
aagtcatgcagaagggccataaattttgatacgcaggcccaaacaagagacggaaccttc
gaatcagggccattggaacaaggttcactcactcaaaacattcaatcaactacaggacta
gaggaagtgaggcttgaagaagtaggctcttccactgatccaaactggtccatgaatcag
atgctgaaaagatacgaatctgtatctgagaaacaagccctgaccactgaactttcagct
gaacataattcttctgagagaaaacaaccttcaaaaacccaaatggagaacaatacagaa
caaattggtaaagtaatttccaattctgagaaaggaaatgtagtagaaaccatgctaaat
aatgacaatcgatcgttaccaggaagttcacatggtcttatcttctgcaagaaccccaca
atgacatcaagagagcaagcaacttgttgcctgaggaaacgttctcgggccatcaaacaa
gcacatactgggagcataaatttaacaggggcccattataatacattatctgcatatcag
tccatgtcctggatgcattttccccacatttacaagaaaaaaagaactgagaaggggcag
aaccctgtttcctcgagtgcatttactacagccacacatttcatgaggccagaaagtgca
tgctctttcaatgacccccagagaaattacatggtatcaaaatccaacaattggatagct
ggacctcaatttaatatttgtaaaagtagaactgtagctgggcatggaggaaacggtgtc
caggataagttgcaaacatatggaggtatcatggctttaggtcagactgagaaaacaata
aaaaaacctagaacagccaaacgactttctggcttggctccatcagaaagaattggtcat
tgtgagaagcagccaatatatccaactaatcaccctcccttagccagttctgcaaaaaat
atcaatacatcgggaacatgcataaatggactattcgagatgatgcatgcaacggtggca
aagaagaaaagaaccaagaagaaaccgtcaaactcagcacttctcaatgtaaacaaagat
cttcaggaccgcagatttgtatccttccattcccaccaattctttttgaagacattaggc
actgctccagaacatgtcaatcaaatgtgctttattgatctcatagttgaacaattaaag
catctagacatcaacaaggaaagcaaccatttgggatatagagagcaagcacttgtatcc
tacaacatacaaaatcaggagcagaatgctattgttgtctatggaagagatggaactatt
gttccatttaatcctataaagaaacgacggccccgacctaaagtcgagcttgatgaagag
actggtagagtatggaagcttttgatgggaaatattaacagtgaaggcattgatggaaca
gatgaagaaaagatcaaatggtgggaagaagagaggaaggtgtttcgaggacgagcagat
tcatttattgctcggatgcatcttgttcaaggagataggcgtttctctcaatggaaggga
tcagttgtggactctgtggttggagtattccttacccagaatgtctcagatcacctttct
agctctgccttcatgtctcttgccgcacgcttccctcctaagccaaagtgtcaccaagca
tcatgctctcaagagccaattatagagttggatgaacccgaagaatgcatgttgaattta
gagaatggcatgaatttgaacaaacagatactacatcagcaaataagtgaagagggctcg
atgaagaaaaatgaaatgagaaaaagtgaaggacgaataattgttgacaacaatgaatct
tctggaagtaatgttgaggatgggagctcaaacaaaggaccagaaaaaataagttatagt
tcatctcataatattcttgagacatgtagcaattctgtgggagaaatatcattgactgga
accagcccaatgcaagcatgtctctacggagagaaagaaacagttgattcattttcatgt
caagactgtttggatttatcgattcctcaaaccagtgagagtattgaaccatcctcagaa
gggaactcagaagatctaccaagctgttccacagaggcacacatcgactcatcagaggag
ctcattcagatggctagactaaatactttaaatgctaattatactattgatacctccgtt
gaccagtcagaaaataccaccaccaacaaattagcagaaaagtgtgacggaagaatagat
gacactttccaaccagatgatcctgaaatatccctcaaagattctatccatcatttgagt
ggctatcaaatgcagcaaaatcagacctcaaaatcattggaggttgactgctgtcagaca
tgcaatggagttcaaacttctaatgattgccagaacaaggacgaacattttcatactgaa
caaagtacactgactgtagaatctgacaatcattataatgttgaaatagagctcgtagtg
gatatcgttgaagcaccgtcaacaagtagtgaattaagcatcaacgcaaaggagccagat
ttgaccttacagtctcaaggcagtgtgattgaagaccctcaaaatgtggagtcgccagta
gaatgtacaaataatgtgcatgaaattccaccaaatgctacagaaatggcaatacagtca
aatccaaaggagtatgatcaacttagtaatgagtttaaagagatgaaccctgcctcttca
agatctcagagaaaacaggttgcaaaggaaaaagaaaataacattaattgggacaactta
cgaaaacagacagaaaccaatggaaagacacggcagagaactgaaaatacaatggactca
ctggattgggaagctataagatgtgcagatgtgaatgagattgcacacgccatcagagaa
cggggcatgaacaacatgcttgctgaacgaatcaaggattttctaaaccgtctggtgaaa
gatcatgggagcattgatctcgaatggttaagggatgttgaaccagaccaagcaaaagaa
tatctactaagcataagaggattgggactaaaaagtgtggagtgtgtgcgacttcttact
ctccatcatcttgcctttccagttgatacaaatgttggtcgtatagctgtacgactggga
tgggtacctcttcaacctctaccagagtccctacagttgcatcttctagaactgtacccc
gtgctggagtcaatccaaaagtatctatggcctcggctttgcaagcttgaccaaagaaca
ctgtacgagctgcactaccaaatgattacgtttggaaaggttttttgtacaaaaagcaaa
ccaaattgtaatgcttgtccaatgagaggagaatgtaggcacttcgcaagcgcatttgca
agtgcaagactcggccttccagcaccagaagataaaagaatagtcagtactactgaatgc
agagaacctgacgataaccaagccagaacaattgatcaaccaatgctgtccctccctccc
tcgacaatatcatctgaagagatcaagccatcagaaacccatcaatcagatggtaagact
acaggtagtacgtgcgtacccattattgaagaaccagcaacaccagagcaagaaagcacc
acacaagatgcaatcatcgacattgaggatgccttctacgaagaccctgatgaaattcct
acaataaaactaaacattgaggagttctcacagaatttgcagaactacgttcaaaagaat
atggaacttcaagaaggcgacatgtcaaaagccttaattgcattaaccccagaagccgca
tcaattcccatgcccaaacttaagaatgttagccggctgcgaacagagcatcaagtctat
gaacttccagatagccaccctcttcttgagaagttgaagttggatagaagagagccagat
gatccttcctcgtaccttttggctatatggacaccaggtgaaacagcaaattctatccaa
ctaccggaaagaaggtgtaatcaagaacaccatcaattgtgtcatgaggaggagtgcctc
tcgtgcaacagtgtcagagaagccaactccttcatggttcgagggactattttgatacca
tgtcggacagcaatgagaggaagctttccactgaatggtacctactttcaagtcaatgag
gtgtttgcagatcacgaatcaagcctcaacccaatagatgttccaagggactggatatgg
aatctacctagacgcaccgtgtattttgggacctccatcccaacgatattcaaaggttta
tcgacacaaggcatccaacactgtttctggagaggattcgtctgtgtaagaggttttgat
caaaaaacaagggcaccccgaccattgatggccaggcttcattttccagccagcaaattg
aacagaggaagaggtaagacagatgatcaataa
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integrated database retrieval system
