Bacteroides helcogenes: Bache_3274
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Entry
Bache_3274 CDS
T01393
Name
(GenBank) polynucleotide adenylyltransferase/metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bache_3274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_3274
Enzymes [BR:
bhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Bache_3274
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Bache_3274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ADV45197
UniProt:
E6SSE6
LinkDB
All DBs
Position
complement(3898656..3900104)
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AA seq
482 aa
AA seq
DB search
MIELTAEELKQFFSDDIFKSISATADELGLECYAVGGYVRDIFLQRPSKDIDVVVVGSGI
AMAEALGRRLGRGAHVSVFKNFGTAQLKYRGVEVEFVGARKESYTHDSRKPIVEDGTLED
DQNRRDFTINALAVCLNRARYGELVDPFGGMQDMKERTIRTPLDPDITFSDDPLRMMRCI
RFATQLNFYIDDGTFDSLCRNRERISIISKERIADELNKIILSPIPSRGFIDLDRCGLLE
LIFPELVALQGVETRNGRAHKDNFYHTLEVLDNICKNTDNLWLRWAALLHDIAKPVTKRW
EPRVGWTFHNHNFIGEKMIPNIFRKMKLPMNEKMKYVQKLVSLHMRPIVIADDVVTDSAV
RRLLFEAGDDIDDLMILCEADITSKNVERKKRFLDNFQLVRRKLKDLEERDRVRNFQPPV
SGEEIMKTFGLSPCRQVGVLKSAIKDAILDGIIPNEYEAARSFMLQRAEKMGLNCLKSPM
PE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatagagttgactgcagaagaactgaagcaattttttagtgacgacatatttaaaagt
atatcagcaacggctgatgagctggggctggaatgctatgcggtaggaggatatgtacgc
gatattttcctgcaacgtccatccaaggatattgatgtggtggtggtaggtagcggcatt
gcgatggccgaagcattgggcaggcgtttgggacgtggcgcacatgtctctgtctttaag
aatttcggcacggcacaattgaagtatcgcggtgtggaggtagaatttgtgggagcacgg
aaagaatcctatacacacgactcccgcaaacccattgtggaagacggcacgctggaagac
gatcagaatcgccgtgactttaccatcaatgcattggctgtctgcctgaatagggcacgg
tatggtgaactggtcgatccgtttggaggcatgcaagacatgaaagaacgaaccatccgt
actccacttgatccggacatcactttcagtgacgatcctttacgcatgatgcgctgcatc
cgcttcgccacccaattgaatttttatatagatgatggcacttttgattctttgtgtcgc
aatcgcgaacgtatttcgatcatttccaaagagcgcatagcagatgaactgaataaaatt
attctttctcctatcccttccaggggattcatcgacttggatcgttgcggcttgttagag
cttattttcccggaacttgtagccttgcagggagtggaaacccgcaacggaagggcgcat
aaggataacttttaccatacccttgaagtgcttgacaacatctgcaagaacaccgataac
ctctggctacggtgggcagccctcctgcatgatattgcaaaacctgtgaccaagcgctgg
gagccccgtgtaggctggacgttccataatcataattttatcggtgagaagatgataccg
aatatcttccgcaagatgaaattacccatgaatgaaaagatgaaatacgtacagaagttg
gtgagcttgcatatgcgtcccattgtgatagcggatgatgtggtgaccgattcggctgtt
cgtcgcctgttgtttgaggcaggggatgatatagatgatcttatgatcttgtgtgaagcc
gacatcacttccaagaatgtggaacgcaagaagcgctttctggataactttcagttggtg
cgtcggaaactgaaagacttggaagaacgggatcgggtgcgtaatttccagccccctgtc
agcggagaggaaataatgaaaacgtttggtttgtctccttgccggcaggtaggggtactg
aaaagcgccattaaggatgccattctggatggcataattcccaatgagtatgaagctgcc
cgtagctttatgctacaacgtgccgagaagatgggattgaattgtttgaaaagcccgatg
ccggagtga
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