Bordetella holmesii ATCC 51541: D560_1297
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Entry
D560_1297 CDS
T03052
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00521
Streptomycin biosynthesis
bho00523
Polyketide sugar unit biosynthesis
bho00541
O-Antigen nucleotide sugar biosynthesis
bho01100
Metabolic pathways
bho01110
Biosynthesis of secondary metabolites
bho01250
Biosynthesis of nucleotide sugars
Module
bho_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D560_1297 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D560_1297 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D560_1297 (rfbC)
Enzymes [BR:
bho01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D560_1297 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AHV91115
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All DBs
Position
complement(1224178..1224750)
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AA seq
190 aa
AA seq
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MNIRPTALAGVLLIEPHMLADDRGWFAERFRQDRFEAALNATGQALPGAFVQENHSRSGR
GVLRGLHYQLAPQAQGKLVSVVAGEVFDVAVDVRPGSASFGQWIGVTLSAADGRSLWIPA
GFAHGFLSLAEGSEVLYKVTAYYSASHERALRWDDPAIGIRWPAAPALMSARDAQAPGLH
EAGRDGQLPV
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgtcccaccgccttggcaggcgtgttattgatcgagccgcacatgctggcc
gatgaccgcggctggtttgccgagcggttccggcaggacaggttcgaggcggcgctcaac
gccaccggccaggctctgcctggtgccttcgtgcaggagaatcattcccgttcggggcgc
ggtgtcttgcgtggcttgcactaccagttggcgccgcaagcgcagggcaagttggtcagc
gtagtggctggagaagtgttcgacgtggccgtcgatgtgcgtcccggttcggccagtttc
ggtcaatggatcggagtgacgctgtcagcggctgatggccgcagcctgtggatcccagcc
ggtttcgcgcatggctttctgtcattggccgaaggcagcgaagtgctctataaggtcacg
gcctactactcggccagccacgagcgcgccttgcgctgggacgaccccgccattggtata
cgctggcccgccgcgcccgccttgatgtcggcgcgcgacgcgcaggcccctgggctgcac
gaggccggcagggatggccaactgcctgtctga
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