Bacillus halotolerans: DIC78_02745
Help
Entry
DIC78_02745 CDS
T06619
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bht
Bacillus halotolerans
Pathway
bht03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DIC78_02745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bht03400
]
DIC78_02745
Enzymes [BR:
bht01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
DIC78_02745
DNA repair and recombination proteins [BR:
bht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DIC78_02745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
RNA_ligase
Calsarcin
Motif
Other DBs
NCBI-ProteinID:
AZV48029
LinkDB
All DBs
Position
577882..579717
Genome browser
AA seq
611 aa
AA seq
DB search
MAFTMQPVLTSSPPKGAEWRYEVKYDGFRCILRIHPSGVTLTSRNGLELNSTFPEIANFA
ETAFQHIEKELPLTLDGEIVFLANPFRSDFEHIQVRGRLKRPDKIQESANSRPCCFLAFD
LLERSGQDVSTYSYTDRKTSLHELMSAAKLPAEPNPYAKETIQYIPSYQHSDPIWEKVIK
YDGEGIVAKKINSKWLEKKRSSDWLKYKNFKHADVCITGFNPHNGFLTVSVLKNGVMTPV
ASVSHGMSEEEKNAIRAIMEQHGHKTASGEYTLEPSICATVQYLTILQGTLREVSFVKFQ
FQMDWTDCTFAQLVRRSKPVHPKLQFTSLDKIIFEKHKRTKEDFIQYMIEISDYLFPFLK
DRAVTVIRYPHGSRGESFFQKNKPDYTPDFVQSFFDGSHEHIVCKDLSTLLWLANQLALE
FHVPFQTITSRRPAEIVIDLDPPSRDDFLMAVQAANELKRLFESFGITSYPKLSGNKGIQ
LYIPLSPEAFTYEDTRQFTQLIAEYCTNAFPDLFTTERLIKNRHGKLYLDYLQHAEGKTI
ICPYSTRGNELGTVAAPLYWHEVQPSLTPAMYTIDTVVDRVKKHGCPFYEFYRNPQDEPL
AAILNQLKKKS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaccatgcagcccgtccttacttcttcacctccaaaaggagcggaatggcgt
tacgaagtaaaatatgacgggtttcgctgtattctccgtattcatccgtcaggcgtgaca
ttaacgagcagaaatggcttagagcttaacagcaccttccctgaaattgctaactttgcc
gaaactgcttttcagcatatagaaaaggaacttccgttaacacttgacggagaaatcgtg
tttttggcgaatccattccgttcagattttgaacatattcaagtgcggggacgtttgaaa
aggccggataagatacaggaatccgcaaactctcggccttgctgctttctcgcatttgac
cttttggaacgaagcggacaagatgtatcgacttattcctatactgaccgaaaaacatcg
ctgcatgagctgatgtctgctgcaaagcttccggctgagccaaatccttatgcaaaggaa
accattcagtatatcccctcctaccagcactccgatccgatttgggagaaggtaataaag
tatgacggagagggaattgtagcaaaaaaaatcaacagcaaatggctcgaaaaaaaacgg
tcatctgattggctgaaatataaaaactttaaacatgccgatgtttgtatcacaggattt
aatcctcacaatggatttctgacggtttctgtgttaaaaaacggtgtaatgacgcctgtc
gcctctgtatcacatgggatgagcgaggaagaaaaaaatgcaatacgtgcgattatggaa
cagcacggacataaaacagcatcaggtgaatatacgctcgaaccatcgatctgcgctact
gtccagtacttaacgattttacaaggcacgcttcgagaggtttcgtttgtcaaatttcaa
tttcaaatggactggaccgactgcacctttgcacagcttgtgcgccgctcaaagccggtt
catccaaaactgcagtttacaagcctggataaaatcatatttgaaaagcataaaagaaca
aaagaagatttcatccagtatatgattgaaatcagcgactacctgttcccgtttctcaaa
gaccgtgctgtcacggttattcgctatccgcacggatcaaggggcgaatcctttttccaa
aaaaataagccggattatacaccggactttgtccaatccttttttgacggtagccatgaa
catattgtctgtaaggacctgtccaccttattgtggcttgccaatcagctcgctttagag
tttcatgttccttttcaaacgattacaagcagaaggccggcagagattgtcattgattta
gatcccccgtcccgagatgactttctgatggctgttcaggcagcaaatgaactcaaacgg
ctctttgaatccttcggcatcacatcgtatccgaagctttccggcaacaaggggattcag
ctttacattcccttgtcaccagaagcatttacgtacgaggacacacgccaatttacacag
ctgattgccgaatattgtaccaatgcatttccagacctatttacaaccgaacgcctgatc
aaaaacaggcatggaaaattgtatctcgattatttgcagcatgctgaaggaaaaacgatt
atctgcccctattccactaggggaaacgagcttggcaccgtagcggcgccgctgtattgg
cacgaggtgcagccatctttgacaccggcgatgtatacaatcgataccgtcgttgaccgg
gtcaagaaacacggatgcccgttttatgaattttaccgcaatccgcaggatgaacctctt
gccgctattttgaatcagctgaagaaaaagagctga
DBGET
integrated database retrieval system
