Blautia hydrogenotrophica: BLHYD_20560
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Entry
BLHYD_20560 CDS
T09635
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bhv
Blautia hydrogenotrophica
Pathway
bhv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLHYD_20560 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhv03019
]
BLHYD_20560 (rny)
Messenger RNA biogenesis [BR:
bhv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLHYD_20560 (rny)
BRITE hierarchy
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
WPX84050
LinkDB
All DBs
Position
complement(2182480..2184033)
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AA seq
517 aa
AA seq
DB search
MASVIIAIVAVVALLIAIPVTYKVAIDNKTKKDAEVIGTAEEKARSIIDEALKAADSKKR
EALLEVKEESLRTRNELEKETKERRAELQKYEKRVLSKEEAVDKKADVIEKREAECTARI
ADLQKKEKRVGELEEQGVRELERISGLTSEQAKEQLLKSVEDDVKVDVAKLYKELEGRAK
EEANKKAKEYVVTAIQKCAVDHVSETTISVVQLPSDEMKGRIIGREGRNIRTLETLTGVD
LIIDDTPEAVVLSGFDPIRREIARIALEKLIVDGRIHPARIEEMVEKAQKEVEAMIREEG
ENAAIDVGVHGIHPELIRLLGRMKFRSSYGQNALKHSIEVAQLSGLLAGEIGVDVRMAKR
AGLLHDIGKSIDHEVEGSHIQIGVDLCKKYKESPLIINAVAAHHGDCEPESLIACIVQAA
DAISAARPGARRETLETYTNRLKQLEDITNQFKGVDKSFAIQAGREVRVMVVPDHINDAD
MVLLARDIAKQIEAELEYPGQIKVNVIRESRVVDYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgtaatcattgcaattgtcgctgtagttgcgctacttattgcaatccctgta
acctataaggtggcgatcgataacaagacgaagaaggatgcggaagttattggtacggct
gaggagaaagcaagaagcatcatagacgaagccttgaaagcagcagactctaagaaaaga
gaagctcttttggaagtaaaagaggaatctctgcgcacccgcaatgaactggaaaaagag
acgaaagaacgtagagctgaattacagaaatatgaaaagcgggtgttgtctaaggaagaa
gcggtggacaagaaggctgacgtgattgaaaagcgggaagcggaatgtacagcaagaata
gctgatttgcaaaagaaagaaaaacgcgtaggcgagcttgaagaacaaggagtacgggaa
ctggaaagaatttcaggtcttacctccgaacaagcaaaagaacaattgttaaaatctgta
gaagacgacgtaaaagttgatgttgcgaagctctataaagaattggagggccgagcaaag
gaagaagcaaacaagaaagccaaagagtatgtagtgactgctattcagaaatgtgccgta
gaccatgtttctgagacaaccatttcggtagttcagcttccgagcgatgagatgaaaggg
cgaattatcggaagggaaggaaggaatattcggacgttggagacgctgacaggtgtcgat
ttgattattgatgacacaccggaggcggtggtcctgtcgggatttgatccgattcggaga
gaaattgcacgtatcgcactggaaaaattaattgttgatggacgtatccaccccgcacgt
attgaggaaatggtggagaaggctcaaaaagaagtggaagcgatgatccgtgaagaagga
gaaaacgcagccattgatgttggagtacatggcattcatccggaattgattcgactctta
ggtagaatgaagttccggtccagttatggacagaatgcgttgaaacattccatagaagtt
gcccagttgtccggcctgttggcaggagagattggggttgatgtacgtatggcaaaacgc
gctggtctgctccatgatattggaaaatctatcgaccacgaggttgagggatctcatatt
cagatcggtgttgacttatgtaagaaatataaagaatctcctcttatcatcaatgcagtg
gcggcacatcatggagattgtgagccagagtcattgattgcatgtatcgttcaagcggcg
gatgccatttccgcggcaagaccgggtgcaagaagagagaccttggagacatatacaaac
agattaaaacagttggaagatatcaccaatcaatttaagggtgtggataagtcttttgct
attcaggcaggtagagaggtccgcgtaatggtggttccagatcacatcaacgatgcagat
atggtattgttagcgagggatatcgcgaagcagatcgaggcagagttggagtatccggga
cagattaaggtgaatgtgattcgggagagccgtgttgtggactatgcgaaataa
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