Beijerinckia indica: Bind_0291
Help
Entry
Bind_0291 CDS
T00688
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
bid
Beijerinckia indica
Pathway
bid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bind_0291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bid03400
]
Bind_0291
DNA repair and recombination proteins [BR:
bid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bind_0291
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bind_0291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
SWI2_SNF2
Kinesin
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ACB93945
UniProt:
B2ID88
LinkDB
All DBs
Position
330987..333641
Genome browser
AA seq
884 aa
AA seq
DB search
MPKAPSSPRTAQSKTAEPAVAKKPRTSKAKASKPEVQPLDEHLAALLNPALNKSLATLEE
HGEPSGFAEARAAFHFDVEPLEMEAPARRRGGRGTAAKPAFSELTGASATAESLQDLLAR
GDPNLRERPPWQPHRPPRPDKSEGGHAFEIVSDYTPQGDQPQAIDELVTGIKAQERDQVL
LGVTGSGKTFTMAQVIARTNRPALILAPNKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQ
PEAYVPRSDTYIEKESSINEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAM
TFTLKRGERIDQRQLIGDLVALQYKRSAGDFSRGVFRVRGDTLELFPAHYEDRAWRIGFF
GDEIESIVEFDPLTGKKVQDLEFVKVYANSHYVTPRPTLLQSIKGIKQELKQRLDELNAA
GRLLEAQRLEQRTVFDLEMLEATGSCAGIENYSRYLTGRRPGEPPPTLFEYLPDNALVFT
DESHVTVPQIGAMYRGDFRRKATLAEYGFRLPSCLDNRPLRFEEWEAMRPQTVHVSATPG
SWEMEQTGGVFVEQVIRPTGLIDPPVEVHPARSQVDDLLDELRQVTRQGYRSLVTVLTKR
MAEDLTEYLHEAGIRVRYMHSDIDTIERIEIIRDLRLGAFDVLIGINLLREGLDIPECGF
VAILDADKEGFLRSETSLVQTIGRAARNVEGKVILYADHETGSMQRAMAETTRRREKQEA
YNREHGITPATIKRGIHDILGSVYEQDHVSVDAGLAQADLKPGHNFKMTIADLEKRMREA
AANLEFEAAARYRDELQRLQAVELAVSDDPLARQEEVEEQAGAYKGARKYGAAANLPVNR
PHKPTDAEMGPHNFGGGEAKPHAGSGKSPQRMKRRASKPTRSAS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagctccttcctccccgcgaacggcccaatccaagaccgctgagccggcggtt
gccaaaaagccaagaacctccaaggcgaaggcctccaagccggaggttcagccgctcgac
gagcatcttgctgccctgctcaatccggctctgaacaaatcgctcgccacgctcgaagag
catggcgagccatcgggctttgccgaggcgcgggcggcttttcatttcgatgtggaaccc
ttggagatggaggcgccggcccgcaggcgcggcggccggggcacggccgcgaagccggct
ttctcggagctcaccggggcctcggcgacagcggaatccttgcaggacctcttggcgcgg
ggcgatcccaatctgcgcgagcggcctccgtggcagccgcatcgtccgccccggcccgac
aaaagcgaagggggccatgcgttcgaaattgtctcggattacactccgcaaggcgatcag
ccgcaggcgatcgatgaattagtcactggcatcaaagctcaggaacgcgatcaggttctg
cttggcgtcaccggctccggtaaaaccttcaccatggcgcaggtcatcgcccgcaccaat
cgccccgccttgatccttgcccccaataaaactttggccgcgcagctctatggcgagttc
aaaagcttctttcccaataatgcggtcgaatatttcgtttcttattacgattattaccag
ccggaagcctatgtgccgcgttccgacacctatatcgagaaggaaagctcgatcaacgag
cagatcgaccggatgcgccacgccgcgacccgtgccctgctcgagcgcgatgatgtgatt
atcgtcgcttccgtgtcctgtatctatggtatcggctcggtcgagacctatacggccatg
accttcaccttgaaacggggcgagcggatcgaccagcgccaattgatcggtgatctcgtt
gccttgcaatacaagcgttcagcgggcgatttttcgcgcggcgtgttccgggtgcgcggc
gatacgctcgaattatttccagcccattatgaggatcgcgcctggcgtattggctttttc
ggcgatgagattgaaagcatcgttgaatttgatcccctgaccggcaagaaagtgcaggat
ctcgaattcgttaaggtttatgctaattcccattatgtgacgccgcgcccgacactgttg
caatcgatcaagggcatcaagcaggaattgaagcagcgcctcgatgaactgaatgcggcg
ggccgattgctggaggcgcaaaggctcgaacagcgcacggtctttgatcttgaaatgctg
gaagcgacgggatcttgcgccggcatcgagaattattcgcgctatctgaccggccgcagg
cccggtgagccgccgccaaccctgtttgaatatctccccgataatgcgctcgtttttacc
gatgagtcgcatgtcaccgtgccgcagatcggtgccatgtatcgcggcgacttccggcgt
aaggcgacgctcgccgaatatggtttccgtctgccgtcctgtctcgataatcgcccgctg
cgtttcgaggaatgggaggcgatgcggccgcaaacggtgcatgtttccgcgacgcccggt
tcctgggaaatggagcagaccggcggtgtcttcgtcgaacaggtcatccgcccgacgggc
ctcatcgatccacccgtcgaggtacatccggcgcgctcgcaggttgatgatctcctcgat
gaattgcgccaggtcacgcgccaaggctatcgcagcctcgtcacggtgctaaccaaacgc
atggccgaggatctgaccgaatatttgcacgaggctggcatccgcgtgcgttacatgcat
tccgatattgatacgatcgagcgtatcgagattatccgcgatctcaggctcggcgctttc
gatgtcctgatcggcatcaatctgttgcgcgagggactcgatattcccgaatgtggtttc
gttgctattctcgacgccgacaaggaaggctttttgcggagcgaaacctcattggtgcag
acgatcggccgcgccgcccgtaatgtcgaaggcaaagttattctctatgccgatcacgag
accggatcgatgcaacgcgccatggccgagacgacgcgccgccgcgagaagcaggaagct
tataatagggaacatggcattacgccggcgacgatcaaacgcggcattcacgacattctg
ggttctgtctacgagcaggatcatgtgagtgtcgatgccggtctcgcccaggccgatctc
aagcccggccataatttcaagatgaccattgccgatctcgaaaagcgtatgcgcgaggcg
gcggccaatctcgaattcgaggcggcggcccgctaccgcgatgaattgcaacggttacag
gcggtcgaattggctgtttccgatgatccgctggcgcgccaggaagaggttgaggaacag
gccggggcctataagggcgcacgcaaatatggcgccgccgccaatctgccggtgaaccgt
ccgcacaaaccgaccgatgccgaaatggggccgcataattttggcggtggcgaagccaag
ccgcatgcaggttccggtaaatctccccagcgcatgaagcggcgggcttcgaagcctacg
cgttccgcatcctga
DBGET
integrated database retrieval system
