Bifidobacterium indicum: BINDI_0290
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Entry
BINDI_0290 CDS
T03564
Name
(GenBank) large protein with C-terminal fibronectin type III domain-containing protein
Organism
bii
Bifidobacterium indicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
fn3
Cadherin_5
Cadherin_4
Pur_ac_phosph_N
Bact_surface_Ig-like
RibLong
Motif
Other DBs
NCBI-ProteinID:
AIC91575
UniProt:
A0A087VT80
LinkDB
All DBs
Position
complement(444270..449816)
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AA seq
1848 aa
AA seq
DB search
MGSGSGPSRRHRIRQRIRSLMSSTRSPWAIPVVVFIALVLIATGAILLNTINRQQVQVDD
GSVWITSQDERKVARFKPGIGEADVALSTNTSRFDLAQSGYTTILGQDGAMSPINASTAS
IGDRTRLGTQVEQIVNGPTVALHQRTTGKVWVGRGDDLKALDPNQQQPILTLGRGGAVSV
TPQGSVYAFRPSDGAVLVVDGPGGKTHRTLESITDGKPIKADGMAVVGDQAVVLSGRTLY
WSKGSTRIHSSGDLTIQETPVDRIQRNDWVGVSDQGGVHLVNLDAPGTDPTLITTGGSGQ
PARPVSSGGCLWAAWSSPSRNFIRLCGTGGAMPSAQDGGRKSDPDPRLSTLQSISPTDNL
VFRANHRQVILNDVLAGNVWNPRESTKMIKVQWRTMEVKETQTRDQKEDSANNQQRFAPS
CDSRSGSIKAEDDQFGIRAGTQALLDPLRNDHQTDCSVLQISDAQTSSGEVTLAPVYDGR
FLQVDAGRANPGTIRINYSITDGHGQVSSAGIVLTIAPAKMIEENRAPEQVDTPPEYEVE
QGATISINALAGFMDPDGDTMTLVAAAPTNSDQVSVTTRTDGRLTLSTGSATSGRVGIRV
TVSDGRQSGDGLVYFSIRPANTLSPLVDPVIRQVQPGRTVRINLKETTHGNSAQPLQLAK
ISQPDEARVEFNTEDLSFTFSAQNPGTYYVPYTVAQGDHTTQGLARLEVAQIKGEAAKPV
AVNDVALLGADQTAIVDPLDNDLDPMGGVLALTSVSADPSSGIKAGIVNHKRIYLTARQI
PSHPVNITYTVANSAGDAQGTITLQPPPLDRGSSTPKADNISAQVRQGGLVTVRVMDHVT
YPDGTTVSLEPDLGRDQGTFKGLVFVSGDVVRYQAGQEPGTYPVTYTVKDNLGNTASGVI
TFEVHTGNQKDKPAPTPDDVQAQVAAGSKVRIPVALTGIDPDGDCDTLSGLGNQAPKLGR
ITQVGADYLIYEAYADSSGTDDFTYAVEDWVGQRAQGHIRVGVFRNSTGGGVFSRDDQVT
MRPGMAVDVPVLSNDISGDDTPLTLDPHLEATGVSEAKVVDNMIRLTTPPQAGTAYVVYR
ARNQAGISDQATLTITTDPKAPIQPPTLQDYDVAPADTIDKRTVEVDLADSMSNPSGTVE
DLKLEVHPSAGEHARVKGGPGSTVLSIDLTDQARAVPYTVTNTRYGITSTAFVKVPAFGV
FPPTIRPKAPDLRVRAGQSITIDIADHVRVGAGKTARIASPDSVSATKSDGSDPYVDPTT
LRFTADRDYSGPASLTFTAQDGVPDGKTIVNSAVLTLPITVEGGREEPPTLSAPPIDLVA
GDPAQTISLKALTRIPRGSASDSYTYSTSGASGPIQVSLTPQGQLSVSADKTAAPGARAT
LPVTIAYKDGTVKGGLTFRVVKTTRPLASIPSRTVRAKAGQSLNVDMLDGAMNPFPDTPL
RVVGVVTDDTSKLTASHSGDGRVTIKTDRDIGASTNTVLVTVEDGTRDKDRRVSASITVS
IVDRPQAPKMLAGSPRAGDGTVSLAWLPGSANGSPIDEYRVSYRSSTGSGQQSCSQATTC
TISGLSNGQDYSFTVQAHNEVGWSPASSPLAARPDVIPGGVRNLSMDGNTKETLTVRWDQ
PENRGSAIDRYLIQTTGSGCGSMRGRSPTSTSAVFSVDHQDAGQACSITVTPSNLAGAGE
ARSVSGSTWSHPDPPAFGKIEQSDPTNNPGLIDLALIPGADHGRPCGDILVTIEGADPSA
DSWTLGCTSGMATGQITLPASMARPGNTIRFKAISRIGGMGEEGQSPATTRELTLAGTRP
PKKRAMESRRAQATREAEYAPSEPRNRGKPQANATSRSYERTRIDRHE
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtgggagcggcccctcgcggcggcaccgaatcaggcagcggatccgttccctc
atgtcctcgacgcgcagcccctgggccatccctgtcgtggtttttattgccctggtcctg
attgcgacaggcgccatcctgctgaatacaatcaaccggcaacaggtacaggttgatgat
ggaagcgtctggatcacctcccaggacgagcgcaaggtggcccgtttcaaaccgggaatc
ggcgaggccgacgtggccttgtcgaccaataccagccgcttcgacctggcgcagagcggc
tacaccaccatcctggggcaggatggtgccatgtcgcccatcaacgcctcgaccgccagc
atcggtgaccgaaccaggctgggaacccaggttgagcagattgtcaacggcccgaccgtc
gccctccatcagcggaccacaggcaaggtgtgggtggggcggggcgatgacctgaaagcc
ctggacccgaatcagcaacaaccaatcttgacccttggccgcggaggggccgtatccgtc
accccccagggttccgtctacgccttccgtccctccgatggagccgtactggtggtggac
ggccccggcgggaaaacccaccgtaccctggaatccataaccgacggaaagccgatcaag
gccgatgggatggccgtggtcggagaccaggcagtggtcctttcaggcaggacactgtac
tggtccaagggatccacccgaatccacagttcaggcgacctgacgatacaggagaccccg
gtcgaccgcatccaacgtaacgactgggtgggggtcagcgatcaggggggtgtccacctg
gtcaatctggatgccccgggcacggatcccaccctgatcaccaccggcgggagcggacaa
cccgcccgtccggtctcttcaggaggctgcctctgggcggcgtggtcctcgcccagccgc
aacttcatccgcctatgcggcacagggggcgcaatgccctcagcgcaggatgggggaagg
aaatccgatcctgatccccgcctgtccacgctccagtccatctccccgaccgacaacctg
gtcttccgcgccaatcaccggcaggtcatcctcaatgacgtcctggcaggcaacgtatgg
aatccccgcgagtccacgaagatgatcaaggtccagtggcgaaccatggaggtcaaggag
acccagaccagggaccagaaagaggactcggcaaacaaccaacaacggttcgccccctcc
tgcgacagccggtccgggtccatcaaggccgaagacgaccagttcgggatacgagcggga
acccaggccctcctggaccccctacgcaacgaccaccagacggattgctcggttctgcag
atcagcgatgcacagacctccagcggcgaggtgaccctggccccggtctacgatggccga
ttcctccaggtcgatgcaggacgagccaaccccggcaccatacggatcaactactccatc
accgacggccacgggcaggtgtcctcggccggcatcgtcctgacaatcgccccggccaag
atgatcgaggaaaacagggcccccgagcaggtcgataccccacccgaatacgaggtggag
caaggagccaccatcagcatcaatgccttggccggattcatggaccccgacggggacacg
atgaccctggttgcggcagcccccaccaattccgaccaggtatcggtcacgacaaggacc
gatggcaggctgaccctatccaccggatccgccacatccggacgagtcggcatacgagtg
accgtctccgatgggagacagagcggagacggactggtctacttctccatcaggcccgcc
aataccctgagtcccctggtcgacccggtcatcaggcaggtccaacccgggaggaccgtc
aggataaatctgaaggaaaccacacacggcaattccgcccagcctctgcaactggcaaaa
atcagccaacccgacgaggcccgggtggagttcaacaccgaggacctctccttcaccttc
agcgcccagaatcccggcacatactacgtgccctacaccgtcgcccagggcgatcacacc
acacaggggctggcacggttggaggtggcccagatcaagggggaggcagccaaaccggtc
gcggtcaatgacgtggccctcctgggagccgaccagaccgcaatcgtcgatcctcttgac
aatgaccttgatcccatgggcggggtccttgccctgacttccgtatcagccgatccgtct
tcgggcatcaaggccggaatcgtcaatcataagaggatctatctgacagcacgtcagatc
ccctcccacccggtcaacatcacctacaccgtcgccaactcggccggtgacgcacagggg
accatcaccctgcagccaccgcccctggatcggggatcctcaacccccaaggccgacaac
atcagcgcccaggtccggcagggaggcctggtcacggtcagggtcatggaccatgtgacc
taccccgatggaaccacagtcagcctggaacccgatctgggcagggaccagggaaccttc
aagggacttgtcttcgtctccggcgatgtggtgcgttatcaggcaggccaggaaccggga
acctatcccgtgacctacacggtcaaggacaacctcggcaacaccgcctcgggagtcatc
accttcgaggtccataccggcaaccagaaggacaaaccggctccaacccccgacgacgta
caggcccaggtggccgcagggtccaaggtccggattcccgtcgccctgaccggcatcgac
cccgatggggactgtgacacactgtccggactgggaaaccaggcacccaaactggggcgc
atcacccaggtcggggccgattacctgatatatgaggcctatgccgactccagtgggacc
gacgatttcacctatgcggtcgaggactgggtgggacaacgcgcccagggccatatccga
gtcggagtcttccggaattccacaggcgggggcgtattcagccgggacgaccaggtgacc
atgagaccgggcatggcagtggatgtgcccgtcctgtccaatgacatttcgggagacgac
accccactgacccttgacccccatctggaggccaccggtgtgagcgaagccaaggtggtg
gacaacatgatccgcctgaccacaccaccccaggccggcaccgcatatgtggtctaccgt
gccaggaaccaggcgggcatcagcgaccaggcgaccctgaccatcaccacggaccccaag
gctccgatacagccgccgaccctgcaggattatgacgtggcccctgccgataccatcgac
aagcgcacggtcgaggtcgatttggccgactccatgtccaatccctcgggaaccgtggag
gacctgaaacttgaggtgcatcccagtgccggagaacatgcccgggtcaagggtggtccg
gggtccacagtcctcagcattgacctcaccgatcaagccagggcggtcccctacacggtc
accaacaccaggtacggcattacctccacggccttcgtcaaggtgcccgcgttcggggta
tttccacccaccatccgccccaaggcccctgatctgcgtgtccgggccgggcagagcatc
accatcgatatcgccgaccatgtacgggtgggagcaggcaagaccgcccgaatcgcgtca
cccgattccgtttcggccaccaagtccgacgggtccgacccctatgtggatccaaccacc
ctcaggttcaccgcagacagggactattccgggcctgcctccctgaccttcaccgcccag
gatggagtacccgacgggaagaccattgtcaactcggccgtcctgacccttcccatcacc
gttgagggagggcgtgaagaaccgcccaccctctcggctccacccatagacctggtggcc
ggagacccggctcaaaccatctccctgaaagccctgacccggattccccggggaagcgcc
tccgactcctacacctattcgacaagcggggccagcggccccatccaggtatcgctcaca
ccccagggtcagctctccgtcagcgcggacaagacggctgcgcccggtgcccgggcaacc
ctccccgtcaccattgcctataaggacggcaccgtcaaagggggcctgaccttcagggtc
gtaaagaccacccggcctctggcatcgataccgtcgcggaccgtcagggccaaggcgggg
cagagcctcaatgtcgacatgctggacggggccatgaaccccttccccgacactcctctg
cgggtggtcggcgtggtgacggacgatacatccaagctgaccgcctcacactccggggac
ggacgggtgaccatcaagaccgatagggatatcggcgcctcgaccaacaccgtcctggtg
accgtggaagacggcaccagagacaaggaccgacgcgtaagcgcatccataacagtcagt
atcgtcgacaggccccaggcccccaagatgctggcagggtccccccgtgcaggcgatgga
acagtctcgctggcctggctgccggggagcgccaacgggagtcccatcgacgagtaccgg
gtctcctaccggtcgagcaccggctccggtcagcaatcctgctcgcaagccaccacctgc
accatcagcggcctgtccaacgggcaggactacagctttacggttcaggcccacaacgag
gtcggatggtccccggcctcctccccgctggcggccagacctgacgtgatacccggcggc
gttcggaacctatccatggacggcaacaccaaggagactctgacggtgaggtgggaccag
cccgagaaccgcggttccgccattgaccgatacctgatacagaccaccggatcaggctgc
ggatcgatgagggggcgctcccccacgtccaccagcgcagtcttctccgtggaccatcag
gatgccggacaggcctgctccatcaccgttacaccatccaatctcgccggtgccggtgaa
gcccggtcagtctccggttccacctggtcgcaccccgacccgcccgccttcggcaagata
gagcagtccgaccccaccaacaaccccggtctgatcgacctggcactcatcccgggcgcc
gaccacggcaggccctgcggggacatcctggtcaccatcgagggagccgacccctcggct
gactcctggaccctgggctgcacttccggaatggccacggggcaaatcactctgccagcc
tcgatggcaaggcccgggaataccatccggttcaaggccatcagccgcatcggcggcatg
ggagaggaagggcagtcgccagccacgaccagggagctgacgcttgcagggacacgtcca
cccaagaagagagccatggagagccgtcgagcacaggccacccgggaagcggaatacgcg
ccatcagaaccacggaaccgggggaaaccgcaagcaaacgcaaccagccggtcttacgag
agaacaaggattgacagacatgaatga
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integrated database retrieval system
