Bifidobacterium indicum: BINDI_1140
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Entry
BINDI_1140 CDS
T03564
Name
(GenBank) alpha-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00946
Degradation of flavonoids
bii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
BINDI_1140
Enzymes [BR:
bii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
BINDI_1140
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Nucleolin_bd
Motif
Other DBs
NCBI-ProteinID:
AIC92402
UniProt:
A0A087VVK2
LinkDB
All DBs
Position
complement(1445896..1448346)
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AA seq
816 aa
AA seq
DB search
MLSDSNHGGGAAPVPDGRIRILVNDRVSPVALEPYEVPRVRWRLDPMLAADDSACSARVI
VADRPNPDMGNGFSRDSVFTWESGIRPIDELNGAALPEVPMGPSERYWLRVELLDAQEQV
VFRSRAATLGTGPGSRWSAQAIWTERDESPQAQNRTQNEGGNAWGWAFLRGVVALPAKPV
RWATLNATASSTRPARQFVYRLWMNGAFQGCGPVFPLGDEARYDGYDVGGILQPGGDNFI
GVIAYATSDQRFAAQLDVCFEDGQVEHYGTDASWKALPGGAAFPDSASIGTRYYRAPAED
IDLSFYPGGLSAAGFDDRDWPPARVKEPFDHCLASPVDSLQTSYLHPKNIRRTTPKSVLL
DFGSVVMGGIRLRATLSGGMDLLIRYGEVVQDDDRVRYQLSAGNVYEDRWRMEAGENAAE
TWGIRVFRYAELVCEESGQAWEELVSAVAAGQVEAAALLTPAIDTHADFRSSRPVLDRVW
KLGRDTVTRLNANIYVDSWTRERAPYEADAWIQQRAHQALDDAPSIGRYTVDYLVGNRTW
PTEWPLYSILAVHDAWMSTGDLGQMRSRYRRLCSLLPFRYLDRESGLVVKEPGRSSQMDG
DLVDWPESERDGYLFGRVNTVVNALSSRAFADMADMAKALGRHGDAVLFARVASRMRAAI
NDRLYDPSAGAYWDGLDHGPSGRPLAHHSLHASAFALAFAEPPRGRIERVGDFLRGRGMA
CSVYVAAVYLDGLYRSGLGADATALISATTGLRTWNHMLDQGSGGTMEAWDPCLKPNTTY
SHPWAASPVYLLPSGLIGNSSLGAWVPLPRLHPATR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagattcgaatcatggaggcggggccgccccggtacctgacggtcgaattcgg
attcttgtcaatgaccgggtgagcccggttgccttggaaccctatgaggttccccgggtc
agatggcgccttgaccccatgttggctgcggatgattccgcttgctcggcacgggtcatc
gtggccgacaggccgaatcccgacatggggaacggcttttcccgagattccgtttttacc
tgggagagcggcatccgtccgattgacgaactcaacggggctgcactgcctgaggttccc
atgggaccctcggagcggtactggctgagggtggaactgctggatgcccaggagcaggtg
gtgtttcggtccagggccgccaccctcggaaccggccccggttccagatggtcggcccag
gccatctggaccgagagagacgaatccccccaggcccagaaccggacccagaacgaaggt
ggaaacgcttggggttgggcctttctgcgtggcgtggtcgcattgcctgccaaaccggta
cggtgggcgaccctgaacgccacggcctcgtcgaccaggccggccaggcaattcgtctac
cgactctggatgaacggtgccttccaggggtgtggaccggtcttccccctgggcgacgag
gcccgctacgacgggtatgacgtaggcgggatcctgcagccgggcggagacaacttcatc
ggcgtcatcgcctatgcaacgtcggatcagaggttcgccgcccagctcgatgtctgtttc
gaagacggacaggtggagcactacggcacggacgcctcctggaaggccctgccgggtggt
gccgccttcccggacagcgcctccatcggtaccaggtactaccgggctcctgccgaggat
atcgacctgtcgttctatcccgggggtctttcggcggccggcttcgacgacagggactgg
ccgcccgccagggtgaaggagccattcgaccactgcctggcttcacctgttgattctttg
cagacctcctacctgcatccgaagaatatccgccgcaccacgccgaaaagcgtgcttctg
gatttcggctccgtggtgatggggggtatacggttgcgggcgaccctttcgggtggtatg
gatcttctgatccggtatggggaggttgttcaggacgatgaccgggtcagataccagctc
tccgcaggcaatgtgtatgaggatcgctggcggatggaggcgggggagaatgcggccgag
acctgggggattcgcgtcttccggtatgcggagctggtctgtgaggagtcggggcaggct
tgggaagagctggtctcggccgtcgccgccgggcaggtggaggccgccgctcttctgaca
ccggcgattgacacccatgccgacttccgatcctcccggcctgtccttgacagggtctgg
aaattggggcgggacaccgtcacgagactcaatgccaacatatatgtggactcttggacc
agggagcgggctccctatgaggcagatgcttggattcagcagcgggctcatcaggccctg
gatgacgccccgtccatcggccgctacacggtggattatctggtgggaaatcgaacctgg
cccaccgagtggcccctgtattccatcctggccgtgcacgatgcctggatgtcgaccggc
gacctcggtcagatgcgcagtcgataccggcggctctgtagtctcctgcccttcaggtac
ctcgaccgggagagcggcctggtggtcaaggaaccgggccggtcaagccaaatggacggg
gatctggtcgactggcctgagagcgagcgtgacgggtatctcttcggcagggtcaatacg
gtggtcaatgccctatcctcccgtgccttcgccgatatggccgatatggccaaggccctg
ggccgccatggtgatgccgtcctctttgcccgcgtggcctccaggatgcgtgccgccatc
aacgatcgtctctatgacccctctgccggtgcctactgggatggactggatcacggaccc
tccggacgtcccctggcccaccactccctccacgcctcggccttcgccctggcctttgcg
gaaccacccagggggagaatcgaacgggtgggggacttcctgcgcggtcggggtatggcg
tgcagcgtttacgtggcggccgtctatctggatggcctttaccggtcgggcctgggggcg
gatgccactgctctgatcagtgcaaccacaggcttacggacatggaatcacatgctcgat
cagggcagtggtggaaccatggaggcctgggatccctgtcttaagcccaataccacctac
tcccacccctgggccgcatcgcctgtctacctcctgccctctggcctgattgggaattcg
tcccttggagcctgggtgccgctccctcgcctgcatcccgcaacccggtga
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