Bifidobacterium indicum: BINDI_1351
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Entry
BINDI_1351 CDS
T03564
Name
(GenBank) tRNA adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bii
Bifidobacterium indicum
Pathway
bii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BINDI_1351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bii03019
]
BINDI_1351
Enzymes [BR:
bii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BINDI_1351
Messenger RNA biogenesis [BR:
bii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BINDI_1351
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AIC92605
UniProt:
A0A087VVT1
LinkDB
All DBs
Position
complement(1713110..1714546)
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AA seq
478 aa
AA seq
DB search
MERVSVDFQVWPEAIELGQLFADQGFELSLVGGPVRDLLLHRPSHDLDFCTSARPEEFEP
ILHKWGSGFWDMGRKFGTLGAVRRRPDGTEIKVEVTTYRRDTYDPDSRKPDVDYGDSLEG
DLSRRDFTVNAMALRVPDLVFVDPYRGANDLAKQVLRTPVDPEQSFEDDPLRMMRAVRFV
AQLGFTIAPETAEAITRMTDRISIVSAERVRDELTKLMLSAHPTKGIEALVESGLADIVL
PEIPALELELDEHHRHKDVFEHTLMVVDRAIALETGPDGPVPAPDLTLRLAALLHDIGKP
KTRRFESGGKVSFHHHDAVGARMARTRLKALRFDHHIIDDVCDLIGMHLRFHGYVDERWT
DAAVRRYAKETGPLFERLNRLTRADATTRNKRKSQIFSAAMDELEERVRQLRKQEDLDAI
RPDLDGGQIMEILDLQPGPMVGKAYRHMLDYRLDMGPVDQDQAVEELKSWWAREGAED
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggtgagcgtggatttccaagtctggcccgaggctatcgaactcggacaactg
tttgccgatcaaggatttgaactgtcgctggtggggggtcccgtccgtgacctgctcctg
catcggccatcgcacgacctggatttctgcacttcggcccggcccgaggagtttgaaccg
attctgcacaagtggggctccggattctgggacatgggccgcaagttcggcaccttggga
gccgtgcgccgccgcccggatggaacggaaatcaaggtcgaggtgaccacctatcgcagg
gacacctacgatccggactcgcgcaagcctgacgtggattatggcgacagtctggagggg
gacctctcccgaagggatttcacggtcaatgccatggcccttcgggtgccggacctggtt
ttcgtcgacccctatcggggtgccaatgatctggccaagcaggtgctgcgtacccctgtg
gatcccgaacagtcctttgaagatgatccgttgaggatgatgcgggccgttcgtttcgtg
gctcagctgggtttcaccatcgcccctgagacggccgaggccataacccggatgaccgac
cgaatcagtatcgtctcggccgagagggtccgcgacgagttgaccaaactcatgctcagt
gcccatcccaccaagggaatcgaggccctggtcgaatcaggtctggccgatatcgtcctg
cccgagattcccgccctggaactggagcttgatgagcatcatcgccataaggacgttttt
gagcacaccctgatggtggtggatcgggccatcgccctggagaccggcccggacggacct
gtgccggcccctgacctgaccctgcgcctggcggctctcctgcacgacataggcaagccc
aagaccagacgtttcgaatccggtgggaaggtgagtttccaccaccatgatgcagtcggt
gcccgaatggcccgtaccaggttgaaggccctgcgcttcgaccaccacatcatcgatgac
gtctgcgacctgattggcatgcatctgcgcttccacgggtacgtggacgagcggtggacc
gatgctgccgtccggcgctatgccaaggagacaggaccgctcttcgagcggctgaaccgc
ctgaccagggccgatgcgaccaccaggaacaaacgcaagtcccagatattctcggccgcc
atggacgagttggaggagcgggtgcgccagctgcgcaagcaggaggatctggatgccatc
cgacccgacctggatggcgggcagatcatggagatactggaccttcaacccggaccgatg
gtgggcaaggcctaccggcacatgctggactaccgcctggatatggggccggtcgatcag
gaccaggccgtggaggagttgaagagctggtgggcccgggagggagccgaggactag
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