Brachyspira intermedia: Bint_1354
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Entry
Bint_1354 CDS
T01847
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
bip
Brachyspira intermedia
Pathway
bip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bint_1354 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bip03400
]
Bint_1354 (uvrB)
DNA repair and recombination proteins [BR:
bip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bint_1354 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bint_1354 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
MAAL_C
DUF244
Motif
Other DBs
NCBI-ProteinID:
AEM21973
UniProt:
G0EPA3
LinkDB
All DBs
Position
complement(1527813..1529861)
Genome browser
AA seq
682 aa
AA seq
DB search
MNFKLESNFKPSGDQVTAIDSLVKGLENKNKYQTLLGVTASGKTFTIANVIEKANRPTLV
MSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDRL
RLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQYE
RVKDVLERARFKVIGDTIEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKLAEQDRVVI
YPAKHFVTGGDKLATGIKLIEEELEEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGYC
AGIENYSRPLSGRKEGDRPACLIDYFPDDFLTIIDESHVSVPQIRGMFFGDRSRKETLVK
YGFRLPSALDNRPLYFEEFEKLTHDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPIIE
VYPIDGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTVE
RVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAAR
NANGRVIMFADSISDAMKVAIDETERRRKIQMEYNKEHNITPKTIIKKIQDIIEREEKVE
TSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQL
KPQKKNVHKNVTSKNPNGKTNK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaaattagaatcaaatttcaagccttcaggggatcaagtaactgcaatagac
tctttggtaaaaggacttgaaaataaaaataaatatcaaactcttcttggagttacagca
agcggaaaaacttttactatagcaaatgttatagaaaaagccaatcgccctactttagta
atgtcgcataacaaaactttagcggcacagctttatagagaattaaaagatttttttcca
aataatgctgttgaatatttcgtttcatattatgattattatcagcctgaagcctatgtt
cctgcaaaagatttatatatagacaaagatgcttctgttaatgatgaaatcgacagatta
agacttaaagcaactacatcgcttcttgaaaggagagatgttataatagtagcttctgtt
tcttgtatatacggtttgggttctcctgaagattacagaaaattatatattgctatagaa
aaagacggagaatatgacagagatgaaataattgaaaaattagtttctatacaatatgag
cgtgttaaagatgtacttgaaagagcaagattcaaagttataggcgatactatagaaata
atgagtgcctattctgatgaggttatcagagtagaatttttcggtgatacagttgagcgt
ataataaaaattaatcctataacaagacaaaaattagcagaacaagacagagttgtaata
tatccggcaaagcacttcgttacaggaggcgataaattagctacgggtataaaattaata
gaagaagagcttgaagagcaatataataaatttaaatccgaaggaaaattagtagaagca
gaaagaatatacggaagaactaaatatgatttagaaatgcttagagaggttggatactgt
gcaggaatagaaaattattctcgtccattatcaggaagaaaagaaggagacagacctgct
tgtttaatagactattttcctgatgattttctcactataatagatgagtcccatgtgagt
gtgcctcaaattagaggaatgttttttggagacagaagcagaaaagagactttagtaaag
tacggtttcagacttccttcagctcttgataacagacctttatactttgaagaatttgaa
aaacttactcatgatacaatatatattagtgccacacctgcagaatatgaattaaagaaa
agctctcaggttgtagagcagataattcgtcctacaggattgcttgatcctatcatcgaa
gtatatcctatcgacggacagatagacagaatacttgaagaaataaaaaagactgtatca
aacaatgaaagaatattcataacaacacttacaaaaaaaatggctgaagaccttacaaaa
tatttaaatgaaaatggagtgagaactcgttatcttcattcagacattcaaactgtagaa
cgtgttgaaataataagagatttaaggctcggtgctttcgatgtacttgtggggattaac
cttttaagagaagggcttgatgtacctgaagtatcactcatattaatacttgatgccgat
aaaacaggatttttaagaaataccactaccctaatacagactataggaagagctgcaaga
aatgcaaatggtagagttataatgtttgctgactctataagcgatgctatgaaagtagcc
attgatgaaacagaaagaagaagaaaaatacagatggagtacaacaaagagcataatatc
actcctaaaacgataatcaaaaaaatacaagatatcattgaacgtgaggagaaggttgaa
acatcttatgagcttcatttcgatttcagacgattcaatgaaagagtgaaaattgatcct
gaacagaaaagtgatgattatataaaagagcttgaaaaagagatgaaaaaagcatcagac
agtttagaatttgaaaaggctattgagataagagaaaaaataaatcagcttaaacaatta
aagcctcaaaagaaaaatgtacataaaaatgtaacttcaaaaaatccaaatggcaaaact
aacaaataa
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